|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 1772 | NP1122A | rrnAC3000 | HQ1833A | HVO_B0061 | Hbo1626 | VNG1551 | Hmu1992 | hla2065 |
1346 | NP1122A | 1736 | 1279 | 1149 | 1194 | 1173 | 1154 | 1300 | 1261 |
1469 | rrnAC3000 | 1279 | 1990 | 1188 | 1342 | 1312 | 1359 | 1333 | 1423 |
1330 | HQ1833A | 1149 | 1188 | 1749 | 1357 | 1398 | 1214 | 1179 | 1221 |
1535 | HVO_B0061 | 1194 | 1342 | 1357 | 1758 | 1564 | 1372 | 1320 | 1358 |
1550 | Hbo1626 | 1173 | 1312 | 1398 | 1564 | 1804 | 1362 | 1292 | 1368 |
1462 | VNG1551 | 1154 | 1359 | 1214 | 1372 | 1362 | 1783 | 1316 | 1384 |
1464 | Hmu1992 | 1300 | 1333 | 1179 | 1320 | 1292 | 1316 | 1908 | 1479 |
1530 | hla2065 | 1261 | 1423 | 1221 | 1358 | 1368 | 1384 | 1479 | 2197 |
289 symbols consensus MTLYGVGLGPGDADLVTVRGKRVLESADVVYSPGRLSRTVATNHVPEERIGDLDFPMTRD #oth 1.1..1.....312.2.11.224.12121..1......2..251.12111........1. NP1122A :::::::::::N:G:I::::RE:::::::::T::::::N:::EY:D:SQL:::::::::: rrnAC3000 :::::I:::::QP:::::::::A:::::::::::::::S:::K::::::::::::::::: HQ1833A ::V:::::::::PK::::K:RDI:D:VTT::::::::::::RQ:::SS:::::::::::: HVO_B0061 ::V::I:::::E::::::K:::L::::A:::::::::::::L:::::::::::::::::: Hbo1626 ::V:::::::::::::::K:::I:::V::::::::::::::L:::::::::::::::::: VNG1551 ::V::::::::EP::L:L::::T::A::::::::::::::::H:::DS::::::::::S: Hmu1992 V:::::::::::::::::::RE:::T:::::T::::::S:::AY:D:::::::::::::: hla2065 ::::::::::::::::::::Q::::T::::::::::::::::E::::S:::::::::::: consensus PDELRRAWKAAAAEVAPRARDGDVAFVTLGDPNVYSTFGHLRRTLDAFHPAVDLEVVPGV #oth 211..1..12..311.23.51211..1.................12....3131111... NP1122A EEK:::::::::EA:::V:T::TA:::::::::::::::::::::::::::::V:::::: rrnAC3000 EEK::A:::E::::I::T:::::A:::::::::::::::::::::A::::E::::::::: HQ1833A ::K::::::D::NA::EK:MSD:::::::::::::::::::::::S:::::ISV::I::: HVO_B0061 :::::::::E::::::A::DSE::::::::::::::::::::::::::::E::::::::: Hbo1626 :::::::::E::::::E::ES:::::::::::::::::::::::::::::::E::::::: VNG1551 :EK::A::RD::::::::::::::::A:::::::::::::::::::::::DI:VQT:::: Hmu1992 E:::::::::::::I:::::::TA::::::::::::::::::::::::::G:TV:T:::: hla2065 A:::::::::::S:I::::C::::::::::::::::::::::::F:::::E::::::::: consensus SAMTAFATALGVEIEAGAGLALREAARGAAPTGPDRMILFKVTDAPATHEGLVEAGYDVT #oth .111..1...11.131.22.2.1..13.21.1....11......112.1.2.22...2.4 NP1122A :TV:::::::D:::T::SE::::::DG::::V::::LV::::::V:T:::K:R::::E:: rrnAC3000 :::S::::::::::T::SS::::::D:::S:::::::::::::::::::::::::::::V HQ1833A ::::::::::DI:::S:T::S:::::N:S::::::::::::::::VE:::K:TA:::N:Q HVO_B0061 ::::::T::::::::S:T::::::::N::::::::::V::::::::::::K:T::::::R Hbo1626 :::::::::::::::S:T::S:::::N:::::::::::::::::::::Y:::T::::::K VNG1551 ::VS::T::::::VD:::::::::::Q::S:::::::::::::::::::::::D:::::: Hmu1992 ::VS::T::::::VA:::S:T:H::::::::::::::V::::::V:::::R::D:::E:V hla2065 ::V:::T::::::VA:::S:::H:::::H:::::::::::::::V::::::::D:::::: consensus YGRRLFMEQGETVVTDDPAEIAERDYYTLAYAEREGLEREPATAAF-------------- #oth 1....1.1211131.31.52231.....1....132446232.13.21212121111111 NP1122A :::::::DGH:S:I:::::AL:::::::V:::::PEALE::V:::::::::::::::::: rrnAC3000 ::::::::::::::::::TD:D:::::::::::KPETRV:Q::D::LEAADES::::::: HQ1833A F:::::::::::MI:T::T:::::::::::::::::I:QTVP:::::::::::::::::: HVO_B0061 F:::::::::::::::::D:L:::::::::::::::V::DV:::E::::::::::::::: Hbo1626 F:::::::::::L::SN:Q::::::::::::::::::::DV:::E::::::::::::::: VNG1551 :::::Y::::D:T::R::::::D:::::::::::DT:QKDR:::-::::::::::::::: Hmu1992 :::::Y::::::::::::E:LT:::::::::::KR:::A:::::T::::::::::::::: hla2065 :::::Y::H::::::S::S:VVD::::::::::KR::DD:::::T:AETAGEDTERARGE consensus --------------DGVSDDGEA-------------------------- #oth 1111111111111135444544224433433222313322233322111 NP1122A ::::::::::::::E:::::---:::::::::::::::::::::::::: rrnAC3000 ::::::::::::::GV:T:G::NGSGEVVRQERSAAALCGDEVQHD::: HQ1833A ::::::::::::::NTS:EESV-:::::::::::::::::::::::::: HVO_B0061 :::::::::::::::::ESG:S::::::::::::::::::::::::::: Hbo1626 :::::::::::::::AE:A:TD:VEPEVSK::::::::::::::::::: VNG1551 :::::::::::::::DTEVA:D::::::::::::::::::::::::::: Hmu1992 ::::::::::::::ETADER:::GTAVEATDGDASADASAGGQR::::: hla2065 PDSTGDDRPESRDGESSA:PA::GPSAAERTERAVAESCGDDPVEGSVE