| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||
|---|---|---|---|---|---|---|---|
| Consensus score | 2518 | NP0544A | VNG0540 | hla0945 | HQ1442A | rrnAC2580 | Hmu2982 |
| 1668 | NP0544A | 2586 | 1448 | 1562 | 1466 | 1558 | 1523 |
| 1886 | VNG0540 | 1448 | 2360 | 1722 | 1708 | 1784 | 1842 |
| 2119 | hla0945 | 1562 | 1722 | 2586 | 1846 | 1984 | 1912 |
| 2040 | HQ1442A | 1466 | 1708 | 1846 | 2497 | 1896 | 1913 |
| 2229 | rrnAC2580 | 1558 | 1784 | 1984 | 1896 | 2555 | 2051 |
| 2221 | Hmu2982 | 1523 | 1842 | 1912 | 1913 | 2051 | 2569 |
356 symbols consensus --MTSNQTRRRFLKATGVAGIAALAGCAG-GGDGGDGGDGSDTEAG--TDGGDGTEGD-- #oth 11233331..111432.221111....3.121.131233235335233433334333333 NP0544A MVD:::LD::SL::GV::::::G::::T::N:::NGN:N:NGNGN:NGNGN:N:D---:: VNG0540 :::PTEH::::::Q:::ATS:::::::::::D::AG----------::----------:: hla0945 :::S:H:::::::E::::::V::::::S:N::::S::S::::GSD:::S::S::SD:SDG HQ1442A :::::D::::::ISVV:A:::TG::::S:::::A::--E::E:::DES:EAAES::A::: rrnAC2580 ::::N:S:::::::TA::::V::::::G::::::::::::ET::G:DM:E:::M:::EMT Hmu2982 ::-MGDH:::::IR:::LVSVT::::::::-D:::G:AED:P::T:::M::::E:AT:TE consensus -----DGDAETRLSWHAGGTGGTYFPLSNEFKTIVEDNTDFTLNVQSTGASVENVGSLAD #oth 122223.4441112.....11...1.1.1.2.11.121.121.1..1...........13 NP0544A :::::::A:GEAIG::::::::::Y:F:Q:L:D:::TE:NH::Q:::::::::::::::S VNG0540 :::::::---:::::::::QS:::Y:::::::::::::::YS::::T::::::::::::K hla0945 SDGSDG::G::::T::::::::::::::::I::::DA::::::::::::::::::::::: HQ1442A :::::S:NEN:::::::::::::::::::::::V:::::::S::::::::::::::::T: rrnAC2580 :::::E::T::::::::::::::::::::::::V:::::::::::::::::::::::::S Hmu2982 SSDGG::Q:D:::::::::::::::::::::::V:::::::::::::::::::::::::N consensus GNADFALIQNDIASFAKNGTGIDAFQDNAIENLRGVATLYPETITVVTLADTGISTLSDL #oth .2...........3..21.1..1..311111..2..........122.12232.2212.. NP0544A :D:::::::::::T::TE:R::A::EG:P:::::::::::::::HIL:RPAAD:E:V::: VNG0540 :::::::::::::Y:::::::::::::R:VD::A:::::::::::LI:R:::::E:VA:: hla0945 :S::::::::::::::R::::::::I::P::::::::::::::::L::::END::SVD:: HQ1442A :S:::::::::::F:::::::::::DG:P::::::::::::::::::::::SN::::::: rrnAC2580 :D:::::::::::::::::::::::::::V:::Q::::::::::::::::::::TQ:::: Hmu2982 :::::::::::::Y:::::::::::::::V:::::::::::::::::::S:::::Q:::: consensus SGATINTGDLGSGTQVNANQILE-AVGIT--DFEEQNASFSQAADQLRNGDIDAAFVVGG #oth 2.211....1........2...1112.2111113..112.1..11.111..1....1... NP0544A E:MRV::::S::::::::L::::S:A:L:PD::D:::SE:A:::::I:D::V::::I::: VNG0540 D:::::::::::::::::L::::::A:V::::Y:::T:::A:::E::::::::::::::: hla0945 ::::::::::::::::::V:::D:SL:V::::YN::::G::::SE::A:::::::::::: HQ1442A ::K::::::::::::::::::::::::::::E:T::::G::::SE::A:::::::::::: rrnAC2580 E:::::::::::::::::::::::S:::S:::YT:::::::::::::::::::::::::: Hmu2982 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus WPVGAIEDLANTNDVEIVPISGDNRAAVKEAASWFADDTIPGGTYSGIDEDVETVAVQAM #oth .......1..1.1.2411114113.412121.1..1...1.21..3.111221.11.... NP0544A :::::::E::T:A::DLLEL:D:E::TLQ:D:Q::T:::V:::::P:::::TD::S:::: VNG0540 :::::::E::::::I:::::E:EA:D:A:::::::::::::S:::::::RSI:::S:::: hla0945 :::::::E::::::I:::::G::S:E::::D::::::::::::::::::::::::::::: HQ1442A ::::::::::T::::Q::::Q:E::QT::G:::::::::::A:::N:V::AT::I::::: rrnAC2580 ::::::::::::::LV:::::::::::A::D::::::::::AD::T:V::A:::I::::: Hmu2982 ::::::::::T::::A::::D::::T:::D:::::::::::::::::VS::::::::::: consensus IATNAEVDEATVETVTAAIFDNVDALTIKTEFISTDSAQDGMSIELHPGAAAYFDA #oth ...22231231.23..1.1.1131311.121.13321.....1.1..2..1.1.23 NP0544A :::RE:Y::DI::E::::::::E:QI::QS::V:R:T:::::P:::::::::::N- VNG0540 :::HDG::::::TA::S:::EHTGD::::PD::D:A::::::::D:::::::::ES hla0945 :::::::PDE::R:::::::::L:E:S::::::TV:T::::::::::D:::::::: HQ1442A :::R:GL:AG::::::::L:E::::::::::::::G:::::::::::E::T:F:EN rrnAC2580 ::::::QP:E:::S::::::::::D:S:::D:::A::::::::::::::::::::: Hmu2982 :::::D:P:::::::::::::::::::::::::GV:::::::::::::::::::::