|
Pairwise sequence scores | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1199 | Hut0946 | Hmu3297 | VNG5063 | VNG5234 | VNG6061 | VNG6465 | rrnB0287 | hla0857 | NP0982A | NP1570A | hla2033 | HVO_1364 | Hbo3417 | Hbo0184 |
950 | Hut0946 | 1223 | 876 | 922 | 922 | 922 | 922 | 904 | 809 | 828 | 759 | 719 | 760 | 733 | 718 |
1032 | Hmu3297 | 876 | 1363 | 1011 | 1011 | 1011 | 1011 | 949 | 846 | 974 | 823 | 814 | 830 | 776 | 817 |
1144 | VNG5063 | 922 | 1011 | 1200 | 1200 | 1200 | 1200 | 1083 | 893 | 872 | 840 | 788 | 837 | 797 | 821 |
1144 | VNG5234 | 922 | 1011 | 1200 | 1200 | 1200 | 1200 | 1083 | 893 | 872 | 840 | 788 | 837 | 797 | 821 |
1144 | VNG6061 | 922 | 1011 | 1200 | 1200 | 1200 | 1200 | 1083 | 893 | 872 | 840 | 788 | 837 | 797 | 821 |
1144 | VNG6465 | 922 | 1011 | 1200 | 1200 | 1200 | 1200 | 1083 | 893 | 872 | 840 | 788 | 837 | 797 | 821 |
1076 | rrnB0287 | 904 | 949 | 1083 | 1083 | 1083 | 1083 | 1204 | 895 | 854 | 801 | 759 | 798 | 784 | 776 |
914 | hla0857 | 809 | 846 | 893 | 893 | 893 | 893 | 895 | 1284 | 945 | 844 | 729 | 768 | 698 | 708 |
897 | NP0982A | 828 | 974 | 872 | 872 | 872 | 872 | 854 | 945 | 1367 | 791 | 733 | 782 | 716 | 756 |
869 | NP1570A | 759 | 823 | 840 | 840 | 840 | 840 | 801 | 844 | 791 | 1287 | 833 | 781 | 730 | 740 |
831 | hla2033 | 719 | 814 | 788 | 788 | 788 | 788 | 759 | 729 | 733 | 833 | 1206 | 840 | 751 | 819 |
892 | HVO_1364 | 760 | 830 | 837 | 837 | 837 | 837 | 798 | 768 | 782 | 781 | 840 | 1216 | 844 | 914 |
824 | Hbo3417 | 733 | 776 | 797 | 797 | 797 | 797 | 784 | 698 | 716 | 730 | 751 | 844 | 1233 | 911 |
852 | Hbo0184 | 718 | 817 | 821 | 821 | 821 | 821 | 776 | 708 | 756 | 740 | 819 | 914 | 911 | 1284 |
197 symbols consensus -------MVIDPLPLQVAAELFPNGISRYAIGGLLVGLGTAVIYLGTGISAGASTFLEST #oth 111222235644333544551..2.144.12..211...233..22.1251......... Hut0946 ::::::::FP::IV:SLFEQF::E::A:::::::F:::::::::AA:A:AP::::::::: Hmu3297 ::::::::MT:::A:::T::::::::G:::V::::::::AV:::V::::P:::::::::: VNG5063 :::::::::::::::::::::::::::::::::::::::VT::::::::::::::::::: VNG5234 :::::::::::::::::::::::::::::::::::::::VT::::::::::::::::::: VNG6061 :::::::::::::::::::::::::::::::::::::::VT::::::::::::::::::: VNG6465 :::::::::::::::::::::::::::::::::::::::VT::::::::::::::::::: rrnB0287 :::::::::A::V:::L:::::::::::::::::F::::A::::V::::::::::::::: hla0857 :::VIDAIFA:L:GP:TVDA::::::::::::::::::::VL:::::::T:::::::::: NP0982A ::::::::IAAF:GSGAVES::::::::::V::V:::::::L::A::::P:::::::::: NP1570A ::::::::STTA:AVSA:M:F::R:::H:LV::::I::::V::::::::I:::::::::: hla2033 :::::::-MNEA:::IET--:::R::AQ:L:::I:I::::VI::V::::H:::::::::: HVO_1364 :::::::-MSGLT::L:DG-::::::AH::L::::I::::::::::::VI:::::::::: Hbo3417 :::::::-MSELV::V:VGD:::R::WP:LL::::::::ASG:::S::LI:::::::::: Hbo0184 MVGLSLSAAGATV::V:VGD:::::WID::L::V:I:::VS::::S:::I:::::::::: consensus LSYVSDQSRFQQ--YVASRDWRVVFTLGIVLGAAVYAVVYQGGA---------------- #oth .111.3331.22421251.1..2...31.13.1141335524362242224211111122 Hut0946 :TF:::R::::::::R:T::::I:::V::::::::::LIW::EV:::::::::::::::: Hmu3297 ::::::::::::::::G:::::::::::::::GLAF:ATV:S:LVSTALYQTGTTGQLYE VNG5063 ::::::::::::::::S:::::L::::::::::::::::::::::::::::::::::::: VNG5234 ::::::::::::::::S:::::L::::::::::::::::::::::::::::::::::::: VNG6061 ::::::::::::::::S:::::L::::::::::::::::::::::::::::::::::::: VNG6465 ::::::::::::::::S:::::L::::::::::::::::::::::::::::::::::::: rrnB0287 :::::G::::::::::::::::L::::::I:::::::::::::::::::::::::::::: hla0857 :::::G::::A::::LP:::::::::V::IG:::I:::I:::DPWSIAGSG::::::::: NP0982A :::::E:::::::::RP:::::::::G:::A:::I::LTF:S:FVTSSLYTPGTTGQLHD NP1570A :::::K:D::::PRF:G:::::I::::S::A::::::IGF::E:WSLSGSV::::::::: hla2033 :::G:KLRH:::PKF:::::::::::::::A:::G:SLATGEFG:::::::::::::::: HVO_1364 ::::::LP::NKAK:::::::::::::S::A:::L:T:LFGD:W:::::::::::::::: Hbo3417 ::::::VP::NRSK::Q::R::::::A:::S:::::GL:LDP:L:::::::::::::::: Hbo0184 ::::::LP::NRGK::R:::::::::G:::::::L:T:TLGP:G:::::::::::::::: consensus ------WTTDVQPWRLLVGGVLVGIGTRVGKGCTSGHGVCGVGSASKTSIVGVLTFLLVA #oth 111222.113.22..123..51..1...2.........1..2..4.3..331.42.243. Hut0946 :::::::::::::::::A::I:::::::I::::::::::::I::R::::L:::I:::G:: Hmu3297 VGGVTL:::N::::::F::::::::::::::::::::::::::::::::L:::A:::T:: VNG5063 :::::::::::::::::::::F::::::::::::::::::::::::::::::::A::T:: VNG5234 :::::::::::::::::::::F::::::::::::::::::::::::::::::::A::T:: VNG6061 :::::::::::::::::::::F::::::::::::::::::::::::::::::::A::T:: VNG6465 :::::::::::::::::::::F::::::::::::::::::::::::::::::::A::T:: rrnB0287 :::::::::::SW::::L::IF:::::::::::::::::::::::::::LA:::A::::: hla0857 :::::::::E:SA:::F:::I:::::::::::::::::I:::::V:R::L:::A:::::: NP0982A VGGFAA:::::S::::F:::::::V:::I:::::::::I:::::V:R::LI::V:::V:: NP1570A :::::::::E:EA:::F:::L:::V:::L:::::::::I:::::V:T:::LN:GI:MVI: hla2033 :::::::::E::::::F:::A:::V:::L:::::::::::::::G:R::::N:AI:V::: HVO_1364 :::::::VS::::::FA:::::::V:::I:::::::::::::::R:R::L:N:A::M::: Hbo3417 ::::::::::::W::::G::F:::V:::L::::::::::::L::L:N::V:N:::::AF: Hbo0184 :::::::::Q::::::FL::T:::V:::L::::::::::::I::G:N::F:N:A::M:L: consensus IGTAQVVAAL--GVSP- #oth 131.2223..11..221 Hut0946 :A:::::M::::::::: Hmu3297 ::::::::::::::::: VNG5063 :V::::::::::::::: VNG5234 :V::::::::::::::: VNG6061 :V::::::::::::::: VNG6465 :V::::::::::::::: rrnB0287 :L::::::::::::T:: hla0857 :V::NA:S::::::GL: NP0982A :L::NA:S::::::GI: NP1570A ::::LAMV::GQ::::V hla2033 V:V::L:M::::::T:: HVO_1364 ::V::LLS::::::::: Hbo3417 :::::L::::::::::: Hbo0184 :::::L:::::::::::