|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 868 | VNG2644 | HQ3071A | hla0405 | HVO_0392 | Hbo1111 | NP0342A | Hut0832 | rrnAC2085 | Hmu0041 |
656 | VNG2644 | 869 | 516 | 594 | 622 | 585 | 589 | 543 | 555 | 535 |
633 | HQ3071A | 516 | 856 | 556 | 642 | 638 | 545 | 522 | 507 | 530 |
681 | hla0405 | 594 | 556 | 863 | 699 | 673 | 569 | 581 | 563 | 579 |
699 | HVO_0392 | 622 | 642 | 699 | 870 | 742 | 573 | 571 | 540 | 563 |
720 | Hbo1111 | 585 | 638 | 673 | 742 | 860 | 604 | 598 | 568 | 590 |
693 | NP0342A | 589 | 545 | 569 | 573 | 604 | 862 | 604 | 635 | 614 |
707 | Hut0832 | 543 | 522 | 581 | 571 | 598 | 604 | 877 | 680 | 683 |
677 | rrnAC2085 | 555 | 507 | 563 | 540 | 568 | 635 | 680 | 1301 | 725 |
686 | Hmu0041 | 535 | 530 | 579 | 563 | 590 | 614 | 683 | 725 | 859 |
175 symbols consensus ------------------------------------------------------MGIMSK #oth 111111111111111111111111111111111111111111111111111111..2.1. VNG2644 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::F:N: HQ3071A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::N: hla0405 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0392 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1111 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0342A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::L::: Hut0832 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::L::: rrnAC2085 MEGRRICVDSCPITCITFCAAHTALGPHHGRSGCAVVIRSMDEKLKRVAHAVSD::L::: Hmu0041 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::L::: consensus ILGG-GNSRSTEDYVELDADDFDTA-AGEADVQVRIARIGDKQDVIDIKDAVYDGDLVIA #oth 11221.5334321....2221244414423344.1114.2213.114........13.2. VNG2644 ::R-:::GS:::::::::::::NAD:::::S:A:H::E:DGQE:::A:::::::::::V: HQ3071A :I:-::ETDTPNE:::::L:::E:V:R:D:::R::F:K::GQ::I::::::::::::::: hla0405 ::::::GN::VD::::::L:::AE::HA:TGM::H::E:::QG:::P:::::::::F::: HVO_0392 ::::::G::T::::::::L:::::::R:D:GLS:H::E::GQ::::A::::::::N:::: Hbo1111 ::S:::DNHT::::::::L:::::::R:::GMS::::T:::::::VS::::::::::::: NP0342A L::-::::H:A:::::::V::::ASE::A:S::::FTD:SE:N:::::::::::::I::: Hut0832 ::::S:A::R:D:::::::G:AS:T::P:::TE:::::::::::::E:::::::::I:L: rrnAC2085 :::ES:S::N:::::::N:NE:EMT:GT:LER:::::::S::::::::::::::::V:V: Hmu0041 :::ES:S::A:::::::S:::L:D::-V:V:R::::::::E::::VE:::::::::I:V: consensus DITRHTTSDRTMEHIIDELRQVAREVGGDIVQKGDDQLIITPTGVAISREKLGR- #oth ..1.12.3.2.2.114.1.11.23..1..1...2...1111.3.1212.311331 VNG2644 ::::LR:E:::V::V::::::::::::::::::::::::V::N:IG::::::N:P HQ3071A :::::::::N:::R:V:D::R:IE::D::M::::::::::A::::::A:Q:I--: hla0405 :::::S:::::I::::::::::::::D::::::::::I:V:::::S::::::--: HVO_0392 :::::::::S:::::::D::::::::D::::::::::IV:::::IS:::Q::NG: Hbo1111 :::::::::S:::::V:D:::::E::D::::::::::I::::::::V:::::S-: NP0342A ::I::::::::::::L:::K:::N:::::::::E::::::::A::G:::S:I::: Hut0832 :::::::K:::::::T:::K:::G:::::::::D::::::::S:::VN:DR:::: rrnAC2085 :::::S:Q:::::::S:::K:::N:::::::::D::::::::A::G:A::R:::: Hmu0041 :::::S:Q:::::::T:::KR:VN:::::::::D::::::::A:::::::R::Q: