| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1836 | hla0203 | VNG0089 | HQ1357A | Hbo1010 | HVO_0474 | NP0020A | Hut0215 | rrnAC2256 | Hmu0136 |
| 1087 | hla0203 | 1996 | 877 | 873 | 918 | 919 | 959 | 946 | 928 | 989 |
| 1211 | VNG0089 | 877 | 1846 | 868 | 955 | 970 | 960 | 1095 | 1026 | 1047 |
| 1194 | HQ1357A | 873 | 868 | 2091 | 1266 | 1009 | 1076 | 1003 | 1020 | 1000 |
| 1278 | Hbo1010 | 918 | 955 | 1266 | 1904 | 1151 | 1042 | 1085 | 996 | 1004 |
| 1247 | HVO_0474 | 919 | 970 | 1009 | 1151 | 1866 | 1076 | 1138 | 1046 | 995 |
| 1391 | NP0020A | 959 | 960 | 1076 | 1042 | 1076 | 1843 | 1145 | 1287 | 1175 |
| 1385 | Hut0215 | 946 | 1095 | 1003 | 1085 | 1138 | 1145 | 1850 | 1255 | 1343 |
| 1444 | rrnAC2256 | 928 | 1026 | 1020 | 996 | 1046 | 1287 | 1255 | 1830 | 1404 |
| 1429 | Hmu0136 | 989 | 1047 | 1000 | 1004 | 995 | 1175 | 1343 | 1404 | 1836 |
310 symbols consensus MDPAVLREDMVDSLEHELK-VLRAEPVSTAMRTVPREEFVEDAP-AY---QDRAFER--L #oth .1522..21.1211425644445534237.123.1.23.132554111113225324226 hla0203 ::E:S::A::IEG:::QIGET:D-:::L::LQR:S:DP::D:GAT:AGGETG:GGGSGGN VNG0089 :EFGA:::E:::::LDAGTALAD:R:ADA:::A:::H:::DAGHR:::::T:Q:::H::R HQ1357A :::::::::::N:V:TQ:D::SV:A:::H::::::::P:::::::-:::::NSSS:H::I Hbo1010 ::::::::::::G:::GMD:--V::S:AL:::::::H::::::::-:::::N::SKF::E HVO_0474 ::NS:::D::::G:::S:E:-:LP:A::I:::S:::H:::T:S::-:::::N:PT:HRDT NP0020A :::::::D:::::::::A:A:V:S:R::V:::A::::P::::ESL:::::A::TG:Q::: Hut0215 ::R:::::::::G:R:RRESL:SEAA:AS::G::::HD:FD:DRT:::::A::ET::::: rrnAC2256 :::::::D::::::Q::S:G:V:SAWL:::::A::::A::GEQQ::::::S::P:::::: Hmu0136 :EQ:::::::::::T::S:GC:QTPRLAD:::::S::A::::DRA:::::S::S:::::F consensus GTRVLAPSTVARLLEAL--DPEPD--------------------------------DDVL #oth 1212.212312.1351.11333211111111111111111111111111111111112.. hla0203 :D:S:TLA::V::IS:::::ADAG:::::::::::::::::::::::::::::::::E:: VNG0089 :::::::::::::VG::::E:RAG:::::::::::::::::::::::::::::::::::: HQ1357A ::TI::::V:::::T::HIST:::INVQMNSPESTENPESADKSIAKGESTHETAS:::: Hbo1010 :ST::S:AN:::::T::::SA:::::::::::::::::::::::::::::::::::E::: HVO_0474 N:TI:::T::::::A::::::Q:::::::::::::::::::::::::::::::::::E:: NP0020A :::::S::AAG:::::::::V::::::::::::::::::::::::::::::::::::S:: Hut0215 :::::::::::::FD::::A:::::::::::::::::::::::::::::::::::::S:: rrnAC2256 :::::S:::AG:V::T:::S::E::::::::::::::::::::::::::::::::::::: Hmu0136 :::::::::A:::::::::A::A::::::::::::::::::::::::::::::::::::: consensus VVGAGVGYTAAVLAEIVGPTHVHAVDIDRRLVYEARSNLATAGYDAVLVDCRDGAEGLPE #oth 1..1.1..11.12.12313331..1..2.32.34..3..3511142....2...23..11 hla0203 ::::::::SV:L::::A:AR:I::I::::EA:AI:::::S::::::::::R:::VN:::: VNG0089 :::::::::V::V:::A::::::::::::QV::D::G:::D:::ED::::::::::::A: HQ1357A :::::::::::::::LIDER::::I::N::V:HT:::::EV:::EG::::T::::H:::: Hbo1010 I::::::::::LV:::::D::::::::::::::A:::::QSVESA::::::::::D:::: HVO_0474 ::::::::::::::::::DAR::::::T:S::::::E::QR:::GG::::::::::::AD NP0020A ::::::::::::::ALTDE:E:::::::::::AA::::::::::PG:::::::::D:::: Hut0215 I::::I:::::LA::::::ER::::::T::V:::::E:::::::::::::::::S:::A: rrnAC2256 :::::::::::::::Q::AAN:::I::T::::I:::Q:::E:::::::::R::::D:::: Hmu0136 I::V:::::::LV::::::ER:::I::T:::::D::::::::::E:::::R::::::::: consensus YAPYDRILVEAAAVEPPRALLEQLADDGRLVMPLGAGEQTLVAVE--------A-GE--- #oth ...1111.1..22351.41.37..232..1.4.4.435.3123131111111123.3111 hla0203 ::::::::L::SV:K:::::R::::EG::I:Y:R:TAV::IA:I:PDSGGDSADD:DDAP VNG0089 :::F::V::::G:ASV:D::AR:::A:::::F:E:V:D:R::S:R::::::::D:::::: HQ1357A :::FN:::::::SL:::K:::N::TAN::::I:::GPS::IAT:D:::::::::Q:N::: Hbo1010 :::F:::::::::I:::NR:VS::EP:::::F:M:GPK::::S:D:::::::::A::::: HVO_0474 :::F:::::::S::R::AR::A::::G::::::K:V:::::::::::::::::D:::::: NP0020A ::::::::::::V::::::::G::::G::::A:::N:A:E:::I:::::::::G:::::: Hut0215 ::::::::L:::::N::::::D:::P::::::::::RD::::T::::::::::G:::::: rrnAC2256 ::::::::L::::ID::::::Q::T::::::::::T:::S:AV:::::::::::D:S::: Hmu0136 :::::K::L:::::::::::R:::::::::::::::A::::TV:A:::::::::D:S::: consensus ----VVERHGPVAFQPLLVEGEQADTVERNRTRREDRERAQRAAQARAGWEQEWIDWDDR #oth 111145655.32214.1..2..242422....2...2.3443133225...12....246 hla0203 TGFRTT:TA::TRL::M::D:::RG-::::::::::A:::EQGHF::H::::D::::::: VNG0089 ::::T:GV::::S:A::::A::::SA::::::V::::::VRE:::S:P:::R:::::E:A HQ1357A ::::ILTEQ:A::LD:::::::SG:GPA::::V:::A:FDESGYF:PT::::::::::KN Hbo1010 :::::::K::::::D::::::::RSGPV::::V:::A:FSDSGYF:PS::::::::::E: HVO_0474 :::::A:SF::LS:K::::D:::TGSIV::::::::P:YEG:GWH:GH::::D::::GGS NP0020A ::::R:AEY:T:::R::::D::R:::::::::::::::H:::::ER:R::::S:::::RH Hut0215 :::::CQ:::G:::A::::::::SGA::::::H::::::::Q:::S:T::::D:::::G- rrnAC2256 ::::-:K:::T:::::M:::::::::::::::H:::::::R::::S::::::::::::G- Hmu0136 ::::-QR:L:G:::::M:::::::::::::::H::::::::Q:::S:::::::::::::Y consensus ---------- #oth 5211111111 hla0203 I::::::::: VNG0089 :::::::::: HQ1357A QQ:::::::: Hbo1010 LSGRQRRYER HVO_0474 G::::::::: NP0020A R::::::::: Hut0215 :::::::::: rrnAC2256 :::::::::: Hmu0136 ::::::::::