|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 1819 | NP0356A | Hmu0678 | HQ2398A | hla1867 | VNG0425 | HVO_1383 | Hbo0168 |
1430 | NP0356A | 1870 | 1232 | 1258 | 1284 | 1281 | 1278 | 1305 |
1421 | Hmu0678 | 1232 | 1824 | 1234 | 1293 | 1260 | 1260 | 1319 |
1430 | HQ2398A | 1258 | 1234 | 1862 | 1316 | 1206 | 1255 | 1347 |
1470 | hla1867 | 1284 | 1293 | 1316 | 3302 | 1280 | 1308 | 1317 |
1431 | VNG0425 | 1281 | 1260 | 1206 | 1280 | 1792 | 1325 | 1314 |
1538 | HVO_1383 | 1278 | 1260 | 1255 | 1308 | 1325 | 1812 | 1465 |
1595 | Hbo0168 | 1305 | 1319 | 1347 | 1317 | 1314 | 1465 | 1821 |
436 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP0356A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0678 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2398A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1867 MKPALSVAFAGSGSRVCRGEYSRATPIATSSARVATLFVSSRRIRAYVRRRRHEPAKDET VNG0425 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1383 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP0356A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0678 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2398A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1867 DDETDGDRRRGARRRAGRHRDGRRRRPRLRRRPGDQDGRSGSGDLPDRRVARNRRRRRCR VNG0425 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1383 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP0356A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0678 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2398A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1867 REPLGGRGRGRVGRRDGTRRGRDRRHPRRGCGARRRARWGPEVDGPRGLGGRRRRPRGRD VNG0425 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1383 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0168 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus --------VYLLVHE--DREYLRAPGEELQTDLGVLEVPEDVEPGDTVETHLGEEFTVRE #oth 1123322453.1122221..1.211.2123....1113.2.312.312...1124.3..1 NP0356A ::MTRADRRV:V:RG::N::F:LE::ATQE:::::::L:::I:::T::::::D:S:E::R Hmu0678 :::::::VT:::I::GE:::::L:A::T:E:::::::::D:P:::QI:::::D:P::::: HQ2398A :::MTASSS::::NDEH::::::::::::::::::::M:T::::::II::::DVA::::R hla1867 RGSGVTDAA:::::::::::::LE::::FG:::::::::::::G:::::::::TV:E::: VNG0425 ::::::::-M:::RG:::::F:V::::::H:::::I:A:D:PT::E::::::::P::::: HVO_1383 :::::::::I::::G:::::::::::D::H::::M:T::::::A:Q:L:::I::::L::: Hbo0168 ::::::::::::::::::::::::::D:::::::::T::::A::::::::::::::V::R consensus LRGPDLFNHLERTGAPMMPRDIGLVVGHTGVAAGDRVLDAGTGTGVLAAYLGRLGADVTT #oth 1......1.1.......1.1.1.122.1..22311.1......1.1.1...1.2112..1 NP0356A :::::::D::::::::::::::::::::::::::::A::::::::::::::::::VE::: Hmu0678 :::::::::::::::::::::::I:::K::LQS::::::::::::::::::A:M:VT::: HQ2398A :::::::::F:::::::I::::::MI::::::R:::::::::::::::::::::::T::S hla1867 :::::::::::::::::::::V:::M::::ASG::::::::::S:I:::::::A:::::S VNG0425 :::::::::F:::::::::K:::::M:::::SGA:::::::::::::::::::A:::::: HVO_1383 P::::::::F::::::::::::::I:::::::::E::::::::::::S:::::::V:::: Hbo0168 ::::::::::::::::::::::::I:::::A::::::::::::::::S:::::MH:E::: consensus YERDPEFADVARENMRLAGVEDRVDVRTGDVTEELDALADEGPFDVLTLDTGDAPEVVAH #oth 1.2.21..2...1..42...323.3.12..21333.3112412..22....21.121122 NP0356A ::::::::E::::::ET:::A:N:T:E:::IAATI:D:--K::::LI::::::::::::Q Hmu0678 :::::::::::::::AM::::::::::S:::::AV::::ETD-:::V:::::::AA::ER HQ2398A ::I::::::::::::S::::T:A:E:::::L:VAF:TV:::::::::::::::::AIIEQ hla1867 ::I:S:::E:::G::VT:::A:::E:::::L::::::::::D::::::::::::::::ER VNG0425 ::Q:AD::A::::::S::::S:A:S::A::::AD::::---:T::::::::Q:::D:::: HVO_1383 F:::A::::::::::::::::Q::::::::I:D:::D:::S:-::A:::::EN:::::R: Hbo0168 :::::D:::::::::::::::EY::::A::::::::SV:E:::::L::::::::AD:::: consensus ADDLLASGGYVAVYSPFVENARAAVEAAREAGLRDVETLETIQREMDFDDRGSRPSTAGV #oth .22..22..22.1.1..1.42.23321..1..2632213.....31.141..1....1.. NP0356A :::::::::FI:T::::::T:::CA::::::::D:::::::::::::::::::::::::: Hmu0678 :PE::VP::FL::::::::Q::E:IQT::D:::::A::::::::AL:VS:::T::::R:: HQ2398A :QT:::::::I:::V::I:HT:DV::::::::VGAIK:Y:::::::::GE:::::::::: hla1867 ::::::P:::L::::::::GT:E:AL::::::FEG:::::::::::::S::::::::::: VNG0425 :::::V:::Q:::::::::::::TTQ:::D:::V:IDAM:::::R::::::::::::::: HVO_1383 :P:::VT::::::::::::GT::::::::::::S::::F:::::Q:::N::::::::::: Hbo0168 :PE::R::::::::::::::S::::::::::::NE:::F:::::R:::EE:::::::::: consensus GHTGYLTFARNE---- #oth ......211.421111 NP0356A ::::::::::FLPSLE Hmu0678 :::::::::::P:::: HQ2398A :::::::IG:I::::: hla1867 ::::::V:G:AP:::: VNG0425 ::::::L::::P:::: HVO_1383 ::::::V::::::::: Hbo0168 ::::::V:::Y:::::