|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2516 | HQ1624A | hla2572 | HVO_0929 | Hbo0621 | NP1886A | VNG1117 | Hut0930 | rrnAC1405 | Hmu1912 |
1680 | HQ1624A | 2533 | 1484 | 1510 | 1467 | 1438 | 1514 | 1498 | 1536 | 1444 |
1933 | hla2572 | 1484 | 2498 | 1691 | 1618 | 1630 | 1597 | 1661 | 1598 | 1624 |
1993 | HVO_0929 | 1510 | 1691 | 2496 | 1828 | 1706 | 1742 | 1648 | 1679 | 1663 |
1980 | Hbo0621 | 1467 | 1618 | 1828 | 2597 | 1705 | 1667 | 1685 | 1649 | 1693 |
1930 | NP1886A | 1438 | 1630 | 1706 | 1705 | 2627 | 1568 | 1718 | 1677 | 1674 |
1916 | VNG1117 | 1514 | 1597 | 1742 | 1667 | 1568 | 2466 | 1710 | 1778 | 1620 |
1960 | Hut0930 | 1498 | 1661 | 1648 | 1685 | 1718 | 1710 | 2480 | 1839 | 1837 |
2033 | rrnAC1405 | 1536 | 1598 | 1679 | 1649 | 1677 | 1778 | 1839 | 2508 | 1885 |
2019 | Hmu1912 | 1444 | 1624 | 1663 | 1693 | 1674 | 1620 | 1837 | 1885 | 2566 |
366 symbols consensus --MGVPCVRVPREAGEATRQRLADADLIDDDYEITVDEGTLYIPVTDPA-------AVPD #oth 111311..2.3324..33.521.1222215412.434224122.121241111111.123 HQ1624A MSD:I::::::PT:::R::TM::EQG:::TL:::DTT:DY:::::V:ST::::::::::: hla2572 :::S::::A:E::R:::V:E::::::IL:G:H::A::GD:I::::A::E::::::::::A HVO_0929 :::N:::::::::S:::A:R:::::G:L:H:H::::A::::::::V:AD::::::::::: Hbo0621 :::N::::::STDE:::::RA:::R::V:QS:::::H::::::::::AS:::::::::E: NP1886A :::S:R:::::::D::TA:G:I::::ALA:::::EL:D:H::L:IVES:DEAALEA:LS: VNG1117 :::A:::::::VDD::::::::::::::::THA:AAAD:A:H:::::A:::::::::::: Hut0930 :::A:::::::::D:::::A:::ER:::::GH::D:V:DAIL::IV::S::::::::::E rrnAC1405 ::::::::::::::::E::::::E:N:V::G:D:::VD:Q::V:::::T::::::::::S Hmu1912 ::::::::P:D:::::ES:::::::::VAEG:D:V:::A:I:::I::::::::::::::: consensus -DLD--VVDRDAPVRETQTMPADILGFEPSYERLGDIVIVDEDDPERAREIADAIVASDL #oth 1334111.343335.24113..15.111.111.1.11212...1511.241.3.123112 HQ1624A :QF:::I:THVVNT:DVP:S:::K:::D:::::::E:I:I:::NH:K:::V:K:::E::I hla2572 :::ATAI:E:::AE:DRPQT::A:::Y:::L:::::::::::::D:::::::::VM:::V HVO_0929 :::T:::::YEP:A:::::T:::L:::::::::::::::L:::::D:::::::::::::: Hbo0621 :EYE::::SF:VES:::::::::::::::T::::::V::L::::A:::SR:::::AE::: NP1886A L:A:::I:::RPAA:::::L:::::::::::::::::A:I:::::::::RV:N::AD:E: VNG1117 :A:S::::SF:::P:R:::T:::::::D:::A::::::::::::SD::HA::::V:E::I Hut0930 :EYA:::::H:S::::G::::::V:::::::::::EV::I::::ID::::::E::M:A:: rrnAC1405 ::FT::::EA:P::::G::::::A:D:D:::::I::VA::::::D::::M:::::MG::: Hmu1912 ::::::::EY::::::S::::::R:D:::::::I:EVIV::::::::::V:::::::::: consensus PVETVLNRASKVKGELRVRDWDVLAGD---------------GTETVHREYGCEFLLDIA #oth 2321.1..1.112.23.1.2.1111231111111112222214..22.....22.51.22 HQ1624A ::K:::::D:::S:PH:T:E:E::::E:::::::::::::::E:::C:::::YT:R:::E hla2572 :C::::::::PIE::::::R::::::N:::::::::::::::::::::::::H:::::V: HVO_0929 KA:::V::::::::::::::::::V:::::::::::::::::S:::::::::H::R:::D Hbo0621 RA:::V::::::::A:::::::I:VD:TDEELSADDQRSSAPS::::::::::::::::: NP1886A :I:::V::::P:E::::::E::::V:::::::::::::::::T::::::::::A:EV::: VNG1117 :::A:::::::I:::Q:::E:::I::::::::::::::::::S:::::::::HA:A::V: Hut0930 :::::V:::::::::Q:::E:::::::::::::::::::::::::A:::::::::V::L: rrnAC1405 ::RA:::::::I:::Q::::::I:::E::::::::::::::::::VT::::::T:D::L: Hmu1912 ::R::::::::::::T:::::::::RP::::::::DDEPDRPA::V::::::::::V:LD consensus EVYFSPRLATERHRVVEQVGAGEHVFDMFAGVGPFAVPMAKRGAEVVGCDLNEAAIEYLR #oth 3.............124214221422........111.2.32..42.1312.24.121.2 HQ1624A S::::::::::::::IT::D:HD::I::::::::::::::A:::D::AAE:::N:V:::S hla2572 :::::::::::::::I:::DPD:A:I::::::::Y:::::A::::::A:::::R:V:::: HVO_0929 T::::::::::::::::AIQE:::::::::::::::::A:AA:::::A:::::::VAF:: Hbo0621 ::::::::::::::::Q::TE::R:::::::::::VI:::::::::::::::A::V:::: NP1886A ::::::::::::::I:SD:E:D:S:::::::::::VI:A:::::DC::V:::A::::::: VNG1117 A::::::::::::::::::T::::::::::::::Y:::::SA::R::AT:V::T::D::Q Hut0930 A::::::::::::::::::::::QA::::::::::VI::::E::TC::V:V:PD:::::: rrnAC1405 :::::::::::::::TK:::E::QT:::::::::::I:F:::::SC::T:I::T:::::Q Hmu1912 A::::::::::::::::::::D:RAL:::::::::V::F:Q:::TA::V:V:PT:::::: consensus ENAERNGVADRVTAIAGDVREVADD-----------YEDWADRIVMNLPHSADEFLETAV #oth 3..21.2.2114.225....43243111111111111411.1.21.....1.12..11.3 HQ1624A I:::Q:D:D:NF:IVS::::TLP:S::::::::::::I:::::LI::::::::::::::I hla2572 ::::::::::::::::::::GI::A::::::::::::A:T:::L:::::::::::::::: HVO_0929 :::A::D::::L:::H:::::::A::::::::::::::G::::LI:::::::SG::D::: Hbo0621 :::R::::EE::::RQ::::D:::::::::::::::::G::N:::::::::::D::D::: NP1886A R:::::S::::I:::H::::::VSEPPDERSEAADS:D::::::::::::::::::D::: VNG1117 A::A:::::::::GV::::::::GE::::::::::::TG:::::::::::T::::::::: Hut0930 :::R::D::::I:::E:::::TVPA:::::::::::HA:::::::::::::::::::::L rrnAC1405 A::::::::::M:G:C:::::::GE::::::::::::::::::V:::::::::::::::: Hmu1912 :::R:::::::::::E::::A::P:::::::::::::::::::L::::::::::::DA:E consensus RLAGDECVLHYYDIQHEDDPFGPGERAIRAAAEPAYDVTVETRHTVRSYAPHEYNVCLDV #oth 31.221142.2.....1122121.33.112.1314.224131122.1....1.3.111.. HQ1624A :::::::MI:::::::::TLYQ::IE:::S::::N:KL::::::E::::::::::I:::: hla2572 :::::D:AI:::::::::::::::R:::E:::GDE::AV:::ERV:K::::::::::::: HVO_0929 :::S:D::I:L:::::::::::::LA:V::::::::E:E:VNEYV::::::::::::::: Hbo0621 ::::E:::::::::::::::::::IE:::E::::Q:::R:D:ERV::::::::::::V:: NP1886A ::::ND:L::::::::DS:::::::::::E::A:E:::DI:::RE::::::::L:::::: VNG1117 A::::::T::F:::::::GR:DA::A::::::R:::::::A::::::::::::F::V::: Hut0930 EI::E:A:V::::::::::::::::::::E::GDE::::::::::::::::::L::V::: rrnAC1405 :::A::::V::::::::::L:::::K:::::::::::::::::::::::::K:H:IV::: Hmu1912 TI:AND::::::::::::::Y::::::::::F::D::::::::::::::::::H::V::: consensus RLTRR- #oth 2.4211 HQ1624A ::Q::: hla2572 ::I::: HVO_0929 :::K:A Hbo0621 T::A:: NP1886A ::::-: VNG1117 S:S::: Hut0930 ::S:-: rrnAC1405 ::::-: Hmu1912 ::A:-: