|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1324 | VNG0890 | HQ2649A | hla2393 | HVO_1577 | Hbo3471 | NP3506A | Hut0427 | rrnAC0451 | Hmu1125 |
1011 | VNG0890 | 1319 | 970 | 991 | 924 | 951 | 887 | 899 | 911 | 853 |
1120 | HQ2649A | 970 | 1327 | 1093 | 1132 | 1092 | 972 | 959 | 985 | 930 |
1139 | hla2393 | 991 | 1093 | 1331 | 1116 | 1123 | 936 | 951 | 970 | 900 |
1172 | HVO_1577 | 924 | 1132 | 1116 | 1334 | 1205 | 970 | 969 | 1005 | 924 |
1173 | Hbo3471 | 951 | 1092 | 1123 | 1205 | 1328 | 969 | 952 | 1010 | 927 |
1057 | NP3506A | 887 | 972 | 936 | 970 | 969 | 1332 | 1047 | 1108 | 1001 |
1084 | Hut0427 | 899 | 959 | 951 | 969 | 952 | 1047 | 1321 | 1124 | 1035 |
1138 | rrnAC0451 | 911 | 985 | 970 | 1005 | 1010 | 1108 | 1124 | 1328 | 1147 |
1063 | Hmu1125 | 853 | 930 | 900 | 924 | 927 | 1001 | 1035 | 1147 | 1232 |
179 symbols consensus MSSIELTSSQKTILQALINLYRESESAVKGEDIAEEVDRNPGTIRNQMQSLKALQLVEGV #oth 1111111311132.21.1111323.3.....3..22.1...................... VNG0890 :::::::A::::V:R::VDR:TQQ:T:::::A::D::::::::::::::::::::::::: HQ2649A :::::::::::S::T:::::H::D:E:::::T::D::::::::::::::::::::::::: hla2393 :::::::::::S::T::::::G:Q:D:::::A:::::::::::::::::::::::::::: HVO_1577 ::::::::::::::T:::::::D::D::::::::A::N:::::::::::::::::::::: Hbo3471 ::::::::::::::T:::::::QT:D:::::::::::N:::::::::::::::::::::: NP3506A :::::::P:::::::E:::::::::::::::::::K:::::::::::::::::::::::: Hut0427 :::::::P:::N:::E:V::::D::::::::E:::R:N:::::::::::::::::::::: rrnAC0451 :::::::P:::N:::E:V:::::::::::::::::K:::::::::::::::::::::::: Hmu1125 -------------::E:V:::K:::::::::::::K:::::::::::::::::::::::: consensus PGPKGGYKPTANAYEALDIQDMDEAAEVPLFHNGEEVEGANVDEIDLSSVHHPELCRAEI #oth ..........22..1..32241141.4..33.12142242..4211.2......3....2 VNG0890 ::::::::::VD::::::::QL:S:::::VT:E::DITDV::KKVN:T:::::::::::V HQ2649A :::::::::::::::::ELDQ:EDP:F:::::EN::INN:::E::::::::::::::::: hla2393 ::::::::::S:::::::::R:::P:D::I::E::::T:V:::G:::::::::::::::: HVO_1577 ::::::::::::::::::VDK:::P:F::::::D:::::V:::::::::::::::::::: Hbo3471 ::::::::::::::::::VEQ:::P:S::::::::P:::V::::V::::::::::::::: NP3506A :::::::::::T::D::K::E:EQ::D::FN:E:DL::E:::Q::::T:::::::::::: Hut0427 :::::::::::T::D::Q:::::H:::::::::::QI:E:::A::N:A::::::N::::V rrnAC0451 ::::::::::::::D::Q:::::Q::::::R::::L::HS::E::::T::::::E::::: Hmu1125 ::::::::::::::D::Q:::::D::R:::R::::LL:D:::E::::T::::::K::::L consensus HLQGSVRDFHEGDSVTVGPTPLSKLQIEGTLDGKDDTSNILILRIDDMRAPAGE--PEH #oth 331.1321221..223.........214.222....13131..4.12.4..3331114. VNG0890 :FR::I::I:D::::I::::::::::VS::V:::::AKGVV::K::A:E:::D::::A: HQ2649A :I::::::::::::M::::::::::V::::I::::::::::::Q::::Q:::S::::A: hla2393 :V:::::::::::::::::::::::V:D::V::::::A:V:::::::::::DEP::A:: HVO_1577 :V:::::E:::::KIR:::::::::V:D::::::::::::::::::::Q::V:::::Q: Hbo3471 :V:::::E:::::E:R:::::::::VV::IV::::::::::::::E:::::E:::::S: NP3506A K::::MA::E:::KIS:::::::::L:::E:E:::::N:S:::T::N:A::::DED:L: Hut0427 T::::LA:YD:::::::::::::::::V:::::::::::K:::T::::V:::EA::::: rrnAC0451 Q:::TMSE:::::::::::::::::::I:::E:::::N:K:::A::::::::::::::: Hmu1125 Q::::IS::::::::::::::::::::I:::A:::::::K:::T:::::::::::::::