|
Pairwise sequence scores | |||||||||
---|---|---|---|---|---|---|---|---|---|
Consensus score | 2145 | HQ1832A | NP1120A | VNG1553 | Hmu1993 | hla2066 | rrnAC3001 | HVO_B0060 | Hbo1625 |
1626 | HQ1832A | 2200 | 1474 | 1442 | 1515 | 1488 | 1525 | 1635 | 1651 |
1828 | NP1120A | 1474 | 2207 | 1710 | 1750 | 1717 | 1716 | 1487 | 1524 |
1857 | VNG1553 | 1442 | 1710 | 2194 | 1794 | 1702 | 1707 | 1509 | 1520 |
1944 | Hmu1993 | 1515 | 1750 | 1794 | 2181 | 1887 | 1727 | 1576 | 1581 |
1859 | hla2066 | 1488 | 1717 | 1702 | 1887 | 2200 | 1662 | 1531 | 1564 |
1870 | rrnAC3001 | 1525 | 1716 | 1707 | 1727 | 1662 | 2214 | 1625 | 1664 |
1704 | HVO_B0060 | 1635 | 1487 | 1509 | 1576 | 1531 | 1625 | 2108 | 1872 |
1728 | Hbo1625 | 1651 | 1524 | 1520 | 1581 | 1564 | 1664 | 1872 | 2131 |
318 symbols consensus ------MTDPQDAIDAA-----GERDERVYEH-AGDDQEGIPFIGAGPGDPGLLTVAGRE #oth 111234322133111234342254214233334112532....1.....1.3....1.13 HQ1832A ::::::::S:T------:::::SSEQPNY---:--TER:::::::::::::E:::::::Q NP1120A ::::MTE::::A::::ERKKHAH:::::::::V:::S::::::::::::N:R::::::K: VNG1553 :::MPEDAT::::::::SQQRQRG::A:::D:T:::T:A:::::::::::::::::T:K: Hmu1993 :::::::::::::::::TDDR:AD::::IQA:A:::V:D::::V::::::::::::T::: hla2066 :::::::::::::::::ADARAE:::P:IA:QT::EI:D:::::::::::::::::T:K: rrnAC3001 MTDETDE::::T:::SVA:::::N::D::::YS::::::::::V:::::N:R:::::::: HVO_B0060 :::::VSA:--------:::::::A:TGF---:--T:E:::::V:::::::D:::::::K Hbo1625 :::::::S::V:-----::::::DA:TGF---:--T:K:::::V:::::::E:::::::R consensus LVEDADLVVHAGSLVNSELLDEYCADAEQVNSVGKDLEELIPLMRDAYEDGRTVVRLHSG #oth 1123................111.21..3.1.1.....1.1...21.113.22.1..... HQ1832A ::TE::::::::::::::::::F:::::::::I:::::::::::TE::TN::::A::::: NP1120A A::S::::::::::::::::EA::D:::L:::::::::::V:::::::::::S::::::: VNG1553 ::::::::::::::::::::::::::::T:S:::::::A::::::::H:::D:::::::: Hmu1993 :::::::::::::::::::::A::::::::S:I:::::::V:::::::::::D::::::: hla2066 :::T:::::::::::::::::A::D:::::::::::::::V:::::::::::D::::::: rrnAC3001 :LA:::::::::::::::::E:::E:::T:S:I::::::::::::::::A:D:::::::: HVO_B0060 ::::::::::::::::::::::F:::::R:::::::::::::::A::::S:::::::::: Hbo1625 :::E::::::::::::::::::::DH::::::::::::::::::A::::S:E:::::::: consensus DPAIYGAALEQMDALEHEGVPTYIVPGVTSAFAASATLRTQLTLNEVANHVAFTRPQGKT #oth ...1....1......1411..1.1.....1...11.11.......111...1....1.1. HQ1832A :::::::::::::::AA:D::::L::::::::::::S::::::::::S:::V:::::::: NP1120A :::::::::::::::::::::::::::::A::::::::::::::::T::::V:::::::: VNG1553 ::::::::::::::::Q::::::::::::::::SA::::::::::GT::::::::::::: Hmu1993 :::::::::::::::::::::::::::::::::::::::::::::G:::::::::::::: hla2066 ::::::::V:::::::::D::::::::::::::::::::::::::G:::::::::::::: rrnAC3001 :::::::::::::::::::::::::::::::::::::M:::::::::::::::::::::: HVO_B0060 :::::::::::::::AEA:::S:L:::::::::::::::::::::::S:::V::::R:R: Hbo1625 :::V::::::::::::S::::::L:::::::::::::::::::::::::::V::::::R: consensus LDAEEDHISEFVEMGDVTVCIYLGTHAVAETMDRLLDDGHDPETPVAVVYHASWPDEDVI #oth .1312..121..12..1.2.2......1311.1..122.1..11..211.........1. HQ1832A :S::::::D:::GF::T::::::::::::::::::::A:::::I:::::::::::::::: NP1120A ::P:D::LA:::::::::A:V:::::::::::E::VEE:A::::::S:::::::::::I: VNG1553 ::::D:::A:::::::::T::::::::IPDV:E:::A:::::::::T::::::::::::: Hmu1993 ::::D:::::::::::::T:L:::::::::::::::::::::D::::::::::::::::: hla2066 ::S:N::::D:::K:::::::::::::::::::::VE::A::D::::::::::::::::: rrnAC3001 ::ED::::::::G:::::T:::::::::S:::::::E::::::::::AI::::::::::: HVO_B0060 :S:::::::D::GF::T:::::::::::S::::::::E::::D::::::::::::::::: Hbo1625 :S:::::::D::GF::T:::::::::::E::::::::E:::::::::::::::::::::: consensus EGTIETIGDRVEDAGYRASALVVIGDAAAGAGYERSYLYGDWA------NRGDDE--SEA #oth 1..132.131223.......113..2.34122....1..11..21222223353544223 HQ1832A K:::GS:AKKI:S:::::::::I::::IT:SA:::::::::::SGSESGDNSS::TETTT NP1120A ::::GD::EK::A:::::::::L:::::::::::::::::G::::::::K::ET::::DT VNG1553 :::::::::::::::::::::A:::::G::::::::::::::::::::::::---:::DT Hmu1993 ::::::::::::A:::::::::::::::RK:::::::::DG::::::::::DGS:::::: hla2066 :::VD:::::LD::::::::M::::P::RK::::::::::::::::::::GS:TDSA::: rrnAC3001 ::::A:::EKL:::::::::M::::::VG:ED::::F:::::::::::::::S:ADSQ:: HVO_B0060 ::::::::E:::::::::::::I::E:VN:SA::::F::::::RGGDAP:DEP:TETQ:P Hbo1625 ::::::::QK:SE:::::::::M::E:VT:SD::::F::::::RGGDAP:D:::SETQ:R consensus DD---------------- #oth 144221111111111111 HQ1832A ESSPIDANIGTNGGESNE NP1120A ::TNE::::::::::::: VNG1553 :Q:::::::::::::::: Hmu1993 :::::::::::::::::: hla2066 :::::::::::::::::: rrnAC3001 :::::::::::::::::: HVO_B0060 :NE::::::::::::::: Hbo1625 :TQ:::::::::::::::