|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2270 | HQ3729A | HVO_0025 | Hbo1472 | VNG2393 | rrnAC2129 | Hmu2722 | Hut2810 | hla1579 | NP3186A |
1963 | HQ3729A | 2388 | 1856 | 1953 | 1846 | 1807 | 1879 | 1791 | 1445 | 1348 |
2029 | HVO_0025 | 1856 | 2262 | 1967 | 1927 | 1862 | 1877 | 1842 | 1483 | 1433 |
2030 | Hbo1472 | 1953 | 1967 | 2256 | 1926 | 1852 | 1879 | 1880 | 1485 | 1416 |
2031 | VNG2393 | 1846 | 1927 | 1926 | 2326 | 1861 | 1923 | 1863 | 1494 | 1482 |
2038 | rrnAC2129 | 1807 | 1862 | 1852 | 1861 | 2343 | 2039 | 2067 | 1419 | 1461 |
2072 | Hmu2722 | 1879 | 1877 | 1879 | 1923 | 2039 | 2265 | 2058 | 1486 | 1422 |
2037 | Hut2810 | 1791 | 1842 | 1880 | 1863 | 2067 | 2058 | 2339 | 1447 | 1457 |
1569 | hla1579 | 1445 | 1483 | 1485 | 1494 | 1419 | 1486 | 1447 | 2279 | 1622 |
1527 | NP3186A | 1348 | 1433 | 1416 | 1482 | 1461 | 1422 | 1457 | 1622 | 2322 |
311 symbols consensus -------------M-MTDYANDVLVSADWVEDHLDEFQSDDPAHRLVEV-------DVDT #oth 11111243334443434322411..111..322.24121..122..1.111111121111 HQ3729A MGVKPTQYIYIDV:TTD:::K:::::PE::T:R:::I:::::DY:::::::::::::::: HVO_0025 ::::::::::::::SNS:::K::::::::::S:::::::::::Y:::::::::::::::: Hbo1472 ::::::::::::::STDG::K:::::PE:::::::::::::::Y:::::::::::::::: VNG2393 ::::::MYVGVHPLR:A:::T::::T::::D::::Q:R::::D::::::::::::::::: rrnAC2129 :::::MSGRLTLRCI:::::::::::::::SE:::::::::::::::::::::::::::: Hmu2722 :::::::::::::-::S::::::::T::::::N::S::::::D::::::::::::::::: Hut2810 :::::MGTVYMIGCI::E:::::::::E::::N:S::E:::::::::::::::::::::: hla1579 :::::::::::::-:---MTD::::T:::::SN::A::D::SDL::::INNPTVTDESEY NP3186A :::::::::::::-:::EHDSPT::::::::E::ED::::::EY::L::NNPTVTA:SEY consensus EAYDEAHAPGAIGFNWETQLQDQTTRDILDKADFEDLLGSHGISEDSTVVLYGDN--SNW #oth 12.1.2.1...12.2.13212.2.1..112.22.1311131..2211.112..11111.. HQ3729A ::::::::::::::::::::::P::::::::E:::T:::N::::D::::II::::::::: HVO_0025 :::::S:::::::::::S:::::::::V:T:E:::::::::::::::::::::::::::: Hbo1472 :::::G:::::::::::::::::::::::T:EE::::::::::::::::::::::::::: VNG2393 :::E:S:::::::::::::::::::::::::DA::S:::::::T:::::::::::::::: rrnAC2129 :L:::S::::::::::::D::::::::::::D:::::::A:::::::::::::::::::: Hmu2722 :::::::::::::::::::::::::::::S:::::::::::::::::::::::::::::: Hut2810 :::::::::::::::::S:::::::::::S:::::::::::::::::::::::::::::: hla1579 TP:E:G:I:::LN:E:DEVFT:E:E:::VS::::AERN:AA::DA:T:::V::GGRVP:: NP3186A TP:E:G:I::::F:D:DDD:S:E::::::::DA::E:NAEA::T:E::I::::GGRVP:: consensus FAAYTYWQFKYYGHDDVRLLDGGRDYWVDNDYPLTDEVPDFSAVEYEASGPFESIRAYRD #oth ..212..112.1..11.2221.113..21..12214141314331.3.3..2.21...12 HQ3729A ::S:::::::::::::::::N:A::::L:::::V:::::EY:T:::::R::::::::::: HVO_0025 ::::::::::::::EN:H:MN::::::::::::T:::I:S:PEQD:S:K::::D:::::: Hbo1472 ::::::::::::::::::::N::::::LE::F::SE:A:::D::::N:K::::::::::: VNG2393 ::::A::::::::::::K:::::::::M:::::TSE:P:S:::TD:D::::::G:::::: rrnAC2129 :::::::::::::::::K::::::E:::E:::E::::::E::E:D:::A::R:::::::E Hmu2722 ::::::::::::::::::::::::E::L::::TT:::::E:::::::::::R:::::::: Hut2810 :::::::::::::::::K::::::E:::E::::T:S:E::::::::D::::R:::::::E hla1579 ::LFG::IYT::::::::VI:::KG:::::::::ST:A:::TSR::::R:::::V:::K: NP3186A ::LFA:::YR:F::::::II:::KP:::E::::::ADEQA:A:Q:::::::Y::::::KS consensus DVENAIDKGLPLVDVRSPEEFSGEILAPPGLQETAQRGGHIPGASNISWAATVNDDGTFK #oth .123.11431.1.........2.111..1..1........1...31112231212..1.. HQ3729A ::DH:::QD::::::::::::::::::::::N::::::::::::::::::D::::::::: HVO_0025 :::K:V:::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1472 ::QH:V:E::::::::::::::::::::::::::::::::::::E:::::::::A::::: VNG2393 ::::::::::::::::::::::::::::::::::::::::::::E:::::::::A::::: rrnAC2129 ::::::ERE:::::::::::::::::::::::::::::::V:::Q::::::VT::::::: Hmu2722 ::::::E:N:::::::::::::::V:::::::::::::::V:::K::::::VT::::R:: Hut2810 ::::::ER:::::::::::::R:D::::::::::::::::V:::Q::::::VT::::::: hla1579 :IDK::EE:I:M::::::::::::VI::E::N::::::::::::::VPIGT:L:E::::: NP3186A :::Q:::S:I:::::::::::T::VI::E:::::::::::::::KSVPTTSVLD:::::: consensus SADELRELYADQGIDGDETTVAYCRIGERSSIAWFALHELLGYDDVVNYDGSWTEWGNLV #oth 231..321.2141121221112...1.....11.12.1....11224...........11 HQ3729A ::E::ESI:::YD:::S:::::::::::::::::::::::::::E::::::::::::::: HVO_0025 ::::::D:::::::E:::S:I::::::::::::::::::::::EN:T::::::::::::: Hbo1472 ::E::E::::::::::N:::::::::::::::::::::::::::E::::::::::::::: VNG2393 ::::::S::::::::::::::S::::::::::::::::::::::NT:::::::::::::: rrnAC2129 DY:::E::::EY:::::S:::::::::::::V:::::::::::::TI::::::::::::: Hmu2722 DF:::Q:::::ED::::::::::::::::::V:::::::::::::A:::::::::::::: Hut2810 DF:::A:::S:Y:::::S:::::::::::::V:::::::::::::AI::::::::::::: hla1579 :::::::::::A:V::::S:IT:::V::::::E::L::::::::::R::::::::::::: NP3186A GP:::::::E:V::TE:QSVIT:::V::::::E:YV:A::::F:::Q:::::::::::TI consensus GAPIEKGEAD- #oth 1..1.1.3121 HQ3729A :::::T:G::: HVO_0025 :::V:::N--: Hbo1472 :::::::N--: VNG2393 :::V:T::--: rrnAC2129 ::::::::::D Hmu2722 ::::::::::D Hut2810 ::::::::::D hla1579 :::::T::--: NP3186A R::::T:D:E: