| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 1401 | NP1962A | VNG1906 | hla1889 | Hut2980 | HQ3315A | HVO_2351 | Hbo2035 | rrnAC3314 | Hmu2286 |
| 864 | NP1962A | 1530 | 628 | 679 | 757 | 584 | 596 | 597 | 723 | 684 |
| 832 | VNG1906 | 628 | 1391 | 724 | 568 | 584 | 643 | 588 | 589 | 615 |
| 960 | hla1889 | 679 | 724 | 2254 | 694 | 635 | 709 | 659 | 710 | 711 |
| 922 | Hut2980 | 757 | 568 | 694 | 1458 | 583 | 657 | 664 | 740 | 700 |
| 761 | HQ3315A | 584 | 584 | 635 | 583 | 1173 | 678 | 848 | 642 | 600 |
| 925 | HVO_2351 | 596 | 643 | 709 | 657 | 678 | 1454 | 813 | 752 | 708 |
| 812 | Hbo2035 | 597 | 588 | 659 | 664 | 848 | 813 | 1189 | 683 | 687 |
| 924 | rrnAC3314 | 723 | 589 | 710 | 740 | 642 | 752 | 683 | 1372 | 929 |
| 932 | Hmu2286 | 684 | 615 | 711 | 700 | 600 | 708 | 687 | 929 | 1429 |
303 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 NP1962A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG1906 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla1889 MTQTNRKAISSSAFGSGASHRGSDSRSGGSRPSASTMFIRSAHPARSKPWRSRGGEVDDC Hut2980 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3315A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2351 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2035 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC3314 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu2286 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ---------------------MRMRRVIALLLLIPLVDALLLVVVATR-----LGAAPTV #oth 111111111111111111112245132333..21.13.312.133.4722111125351. NP1962A :::::::::::::::::::::-MRL:::G::::V:V::I:::::L:::LGPVTI:PVA:: VNG1906 ::::::::::::::::::::MP:F:S:FLA::VV:::::VF::F::GE:::::::WQL:: hla1889 RRTDSKHRTKRAMGPRRKDDG::P:TLL::::VV::::::F:I::::::::::::W:I:: Hut2980 :::::::::::::::::::::--:L:I:::::::::::MVM:::::GK::::::::V::: HQ3315A ::::::::::::::::::::::KA:W::VG::S:::::T::::PI::A:::::I:LLT:: HVO_2351 :::::::::::::::::::::::T:TLM::::::::S:::::::::QY:::::IDLV::: Hbo2035 ::::::::::::::::::::::QT:W:::A::S:::L:T::::PL:ST:::::I:F:::: rrnAC3314 :::::::::::::::::::::--:L:::G:::::::F:IV:::T::IPF::::::SLV:: Hmu2286 :::::::::::::::::::::--:L::::V::::::L:::::::A::QFD::T:S::VV: consensus ALVVLTALVGMLLVRAEGRHTLRRIQRKLARGELPTDELLDGGLLIAAGAFLLTPGLVTD #oth 12..1.113.2122.....2.1322.42315.34..1.13..21.21..112....31.. NP1962A :V::::::L:L:FA:::::::::K::::::N:DA::N:::::L:::I::TLM::::VI:: VNG1906 ::::::::L:T:F::::::A::S:L:ASV:::DP::N::V:::::::::::::::::::: hla1889 :::::::VL::::L:::::A::A:V::::::::P:::::::::::::::::::::::::: Hut2980 L:::::G:I::::::::::::IAK::::VLQ::A::::::::A::LI:::L::::::::: HQ3315A LI::::G:F::V:::::::T:IQ:::Q:I:::T:::N::I::::::::::::::::I::: HVO_2351 ::::::G:::::I::::::::::SL:S:F:G:D:::N:VM:::::::::::::::::::: Hbo2035 L:::::G:::::::::::::::SKL:Q:V:T:GI::::::::::::::::::::::V::: rrnAC3314 :::::::::::::::::::A:::K::QR::V::::::::I:::::::::::F:::::::: Hmu2286 L:::V:::::::::::::::::::::E:::T::V:::::V:::F:V:::::F::::F::: consensus AIGFLLAIPVTRYPIRIALKRYVVTPYLDAKTGGFVSGNVYVGGFPGGD-GAGGG-GASG #oth 52.12212.41.212.633112213.31143141.31.2.123...34353434334542 NP1962A F::L::VL:P::::::::T:K:::::F::D:::::A:::::::::::::ET::Q:FPGG: VNG1906 :L:::IV:::::VAF:WGV:::-:::K::::::::::::::TF::::::G::::D:PR:: hla1889 :V:::::L:LS:V:::M:::K:::I::::SE:N::TT::::I:::::NGD:D:N:A::GF Hut2980 V:::V:V::P::::V:L:::KW::::::EK:::::AT:S:::::::ND:GDGPV:GDS:: HQ3315A I:::AS:::::::::::LT:::I:::I::RR:ND:I:::::ID:::DE::-----:---- HVO_2351 T:::::::::::::::EV:::F::K::::KRAD:::T:::WTT:::Q::F:P::PG:SP: Hbo2035 LL::::::::::::::KVV::F::R:::EKQ:D:::::::W:::::DE::-----:---- rrnAC3314 FV:L:::V:F::::V:A:TR:W::R::I::::S::A::Q:::::::NDEN:PA:P:::T: Hmu2286 LL:L:::L:I::A:::M:A::WII:::::::AQ::::::::::::::Q-::DA:P:SP:: consensus PGGGGGPGGSDGIGT-GG-----AGDLDPEDATDGDR-----------------DDDDED #oth 461244524643436443444226546233336262311111111111111111536363 NP1962A GP:::F::DAS:PDAA:DTVEMGEA:YEFT:PEPDED:::::::::::::::::::T:S: VNG1906 F:::A:D:DD:T:NLGDD::::::Y:VSF::DA:::Q:::::::::::::::::------ hla1889 TM:::FG::NF:N:DGF:SDDEV::GNS:G:DS::::FDDADHADDVVDVDFTVE:EET: Hut2980 :::F:::::IG:::GI::STD::D:VR:IGE:Q:L:D:::::::::::::::::VE:GD: HQ3315A ---------------:--:::::TVN::::EY---G::::::::::::::::::P:E:R- HVO_2351 :S::S:SS::GSS:SSS:GDG::VY:A::DSYR-F::::::::::::::::::::SN:ST Hbo2035 ---------------:--:::::VVN::::NY---G::::::::::::::::::A:::NT rrnAC3314 :D::PSS:SGS:S:::--:::::--SF::TE:::V:F:::::::::::::::::::S::N Hmu2286 :A::PDT:P:::P::A:SDGS::PSGF:HDN:::I:F:::::::::::::::::EER::- consensus --- #oth 133 NP1962A RTA VNG1906 ::: hla1889 RSD Hut2980 RPE HQ3315A ::: HVO_2351 ::: Hbo2035 ::: rrnAC3314 ::: Hmu2286 :::