[R] (-) COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase 7 genomes BUD1318 7 proteins a Hsa Halobacterium sp. NRC-1 b Hma Haloarcula marismortui f Hvo Haloferax volcanii g Hbo Halogeometricum borinquense h Hmu Halomicrobium mukohataei i Hut Halorhabdus utahensis j Hla Halorubrum lacusprofundi q Nph Natronomonas pharaonis x Hwa Haloquadratum walsbyi VNG0705 rrnAC0506 HVO_1234 - Hmu1172 Hut0953 - NP3956A HQ2431A

Pairwise sequence scores
Consensus score	4082	HQ2431A	VNG0705	HVO_1234	rrnAC0506	Hmu1172	Hut0953	NP3956A
2573	HQ2431A	4185	2129	2234	2334	2225	2207	2188
2759	VNG0705	2129	4020	2298	2229	2368	2335	2297
2949	HVO_1234	2234	2298	3972	2486	2522	2500	2426
3267	rrnAC0506	2334	2229	2486	4183	2906	2781	2682
3184	Hmu1172	2225	2368	2522	2906	4069	2778	2732
3204	Hut0953	2207	2335	2500	2781	2778	4104	2704
3062	NP3956A	2188	2297	2426	2682	2732	2704	4072

537 symbols
consensus       ------------------MTVWVLGDQLTRRAGPLAR---RPDERVLLIEAHAFARRLPY
#oth            112222221212222223211121.22.42441.12421142131.12..143122122.
HQ2431A         MIQPLVGETPTYEVDGKTTVP:I::T::HPDV:::::A::PSGS::::::::D::::KS:
VNG0705         :::::::::::::::::MT::::::N::::T::::TD:::D::-:::::::A:L:::RR:
HVO_1234        ::::::::::::::::::::::::::::DPS:A::--:::QS:D:::M::::::GD::::
rrnAC0506       ::MRIQAYTVTNGSVRLP::::LR::H:I::S::V:::::::::P:::::SES:::K:::
Hmu1172         :::::::::::::::::::::L::::::S::F::::D::::::D::VM::SSG:L:::::
Hut0953         ::::::::::::::::::V:::::::::::EH::V:E:::::::P::::::::::E::::
NP3956A         :::::::::::::::::::::L::::C::-EF::::SDARST:::::C:::R:::::K::

consensus       HPQKLTLVFSAMRHFRDELRDAGRDVDYLRAETFGDGLDAHFDAHPDDDLVTMRPASHGA
#oth            .12.1322.11......4.112.22.4.5221..3211231.224.3.312333234324
HQ2431A         :HD::AIM::G::::::::E:::Y::V::K:P::S:A:AEY:ERY:::E:IQ::SP:YNS
VNG0705         :::::CM::A:::::::::::D:V::V:E::::::A::::Y:::::G::::VQ:::N::T
HVO_1234        :::::A:::A:::::::D::ER:YE:T::QT::::E:::RY:::A:G::::V:D:P::::
rrnAC0506       ::H::I:L:::::::::N:::D::T:R:QQT:::E:::A:::E:N:::T:::H::QTES:
Hmu1172         ::H:P::::::::::::A::E:::T:::Y:::::E::FET::ER:::::::::T:::::G
Hut0953         ::::::::::::::::::::::::::H:HQV::::::::::::DT:A:::RM:C::G-:D
NP3956A         ::H::::::::::::::R::E::YT:::R:V:::AE::::::A:::E:HI::V:RTA:::

consensus       ADRLRELVAARGGSLEFVANDRFLCSPAQFDDWA--RDDDPYRHEDFYRHMRRETGYLM-
#oth            33.134.1243..3225.2142.422255..2.22242423111141..32.111.1..1
HQ2431A         :M:FD:::EDV::QYRS:E:EL:VGTTTA::E::NNS:T::F:::T:::W::GKS:V:::
VNG0705         :::::::::::::::RV:::AQ:R:::::::::M::GTEP:FK:RP:::::::::::::R
HVO_1234        GE:::G::S::::::TL:E::L::TT::D:::::::G:A:S::Q:HW:::A:::::V:::
rrnAC0506       QA::ES:::EA::AV::::D:::::A:S:::E:-:::G:GR::::::::F::::::::::
Hmu1172         TE:::T:IERH::T:TT:PDE::::A:GT::E:-::T:GP:::::S:::S::::::::::
Hut0953         :::::S::EE::::::I:E:SL:C::RKL:::::AD:TG:N:::::::::I:::::::::
NP3956A         T:::QR:::N:::TV::::DP::H::REE::A::::DG:P:::::S::::::::::::::

consensus       DDDDPVGGEWNYDDQNRETPPDEWTPPEPPQFEPDETTREVREWVADTF-DG-YDEAPYG
#oth            2112.1..1.11.12.111.132131.42241.3.141331421.443221221222121
HQ2431A         N:G:::::::::::E::DF:::D:ES:PVYDP:H::L:T:TMS::ES::::-:-------
VNG0705         :::T:E::D:S:::::Q::::A:YDS:SVGG::Y::HVPA::D:::TE:::-:-------
HVO_1234        :G:::::::::::::::::::EG:::::A:R::::::::::I:L:RERYP:-:-------
rrnAC0506       A:G:::::::::::::::::::G::::::::::::DV:ED:I:::YS:::::S:::Q:F:
Hmu1172         :G:::::::::::E::::::::::E::TV:T::::::::R:QS::R:HH:::G:E:::::
Hut0953         :::E:::::::::ED:::::::D::::G::T::R::I::D:DS::::R::::S:::::::
NP3956A         :G:E:::::::F::E:::F:GP:YV::::::::::::::::::::DA::GEDG::D::::

consensus       GAWADPEPFRWPVTREQALQALEHFVEDRLAEFGPYQDAMLRDEWAMSHSLLSSSLNLGL
#oth            13.2111314.....22.331.33.233.124..2.1..13432.114.1..1213.1..
HQ2431A         -T:G:TDSLI:::::::::EK:H::ISE:IPS::::::::R:ED:::::A::G::I::::
VNG0705         -T:G::DG:D::::::::TR:::S::A::::G::::E::V:A:D:HLE:::::AAV:I::
HVO_1234        -::GS::::V::::::A:R:::S::::V::P:::::::::VDG:::LC:::::AAT::::
rrnAC0506       :D:T:::::::::::R::V:::D:::TN::T:::S::::::E:::::::::::T::::::
Hmu1172         :D:::::::::::::Q::RR::DA:::::::D::A:::::VES::::A:::::T::::::
Hut0953         :S:::::A:::::::Q:::S:::D:CT::::T::S:::::Q::S::::::::::::::::
NP3956A         :::::::::S::::::G::::::A:I:E::PT:::::::::G:::::N:A::::::::::

consensus       LHPAEVIEAAIDAY-ERGDAPLNSVEGFVRQVLGWREFMRHVYRREMPELAAANQLGATE
#oth            .3.4.122222311223112112.2..12..21.....2..1..13212113....2152
HQ2431A         :::V:::QEIET::HN:D:I:::::::VI::M::::::::::::HT::::GS::::D:QH
VNG0705         :::E::AD::L:::RS:D:I::::I::::::LI:::::::::::HQ::G::T::::::DR
HVO_1234        :::R:AV::VEE::::::::::::A:::::::::::::V::::::S:::::E::::DQ::
rrnAC0506       :G::::::R::T::::D:::::::::::I:::::::::L:::::::::S::E::::::N:
Hmu1172         :G::::V:R::E::::A:::::H:::::::::I:::::V::::::::::::T::::::S:
Hut0953         :D:R::::R:::TF::::::::::::::::::::::::::::::::RD::G:::::N:::
NP3956A         :S:S::::::LA:F::E:SVSIA:::::L:::::::::V::A:::T-:GM::::::::A:

consensus       DLPDFYWT-GETDMACLADAVDGVRDRGYAHHIERLMVLSNFALLYGVEPAALNRWFHAG
#oth            2..421.2112.1.1.1332223.25...1...1...2.1..2133.22.33.21..122
HQ2431A         :::SA::S::::N::::GET::D:KQ:::S:::Q:::::A:::T:W:AD:SE::E::N:T
VNG0705         :::PL:::PTA::::::GS:AGR:Y:::::::::::::::::::T::AR:Q::TE:::G:
HVO_1234        P::EA:::::::::N::SE::GH:::::::::::::::::::::V:::D::E:D::::L:
rrnAC0506       A::::::N::D::::::S:V:::::E:::S:::::::I:A::G:I::::::Q::::::::
Hmu1172         :::A:F:::::::::::DA:I::::K:::::::::::L::::S::L:::::Q::::::::
Hut0953         P::::F:::::::::::::VIE:::R:::S::::::::::::GTTF:I::R::::::::A
NP3956A         P::E:F::::D:::::V::::::::T:::::::::::::::::T::::::SR::E::::A

consensus       YVDAFHWVTTPNVVEMGLFGTDVFATKPYASSANYVDKMSDYCSDCPYYKTKTTGEGACP
#oth            1...11..1.....2..311312121...1112..111.1.1.13.41222111.12...
HQ2431A         ::::Y::::::::::::QY:EG:::::::V:::::I:::::::GE:E:::::D::D::::
VNG0705         F:::YD::V:::::G::S::::A:TS:::::::::I:::T:H::::AFDPDS:V::R:::
HVO_1234        F:::::::::::::A::S:A:::LSS::::::G:::N:::::::S:::AVS:::::N:::
rrnAC0506       ::::::::::::::::::Y:AG::::::::::::::::::::::G::::::::::D::::
Hmu1172         ::::::::::::::::::Y:SGA:::::::A::::::::::H::::Q:::::::::R:::
Hut0953         ::::::::::::::G::T:AS::LS:::::ATS::::R:::::G::R:::::::::N:::
NP3956A         F:::Y:::::::::G::T::::TLS::::VA::::I:R:::H::G::::::::::D::::

consensus       FNALYWDFLDRNEDQLRSNHRMGLVYSHVDDK-DDEELEAIRERAAEIREMARAGTL
#oth            1.2......321.321.111....1...3.3.12222342.23.1442.3332313.
HQ2431A         :::::::::::::ET:::::::::M:::::N:RE:G:M:N::::VSDL:::E:::::
VNG0705         ::S::::::ATH::T:::::::::::::L:S:R:AGK:A::::::QRV::GVA::R:
HVO_1234        :::::::::KE::AR::GTG::::M:::::R::::::W::::A::D:::R:G:::::
rrnAC0506       :::::::::::::ET:::::::::M:::::N::S::::GE::::::::::::TK:E:
Hmu1172         ::T::::::::::S::::::::::::::L::::::DQ:T:::Q::D:L:TR:ADSE:
Hut0953         L::::::::G:::::I::::::::::::W:::::E::RD::SD:::A::QA::D:D:
NP3956A         :::::::::G:::S::::::::::::::Y::::S:G:R:::AD::ETL:QR::N:::