|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2019 | HQ2504A | HVO_1164 | Hbo0394 | VNG0804 | Hut0957 | rrnAC0521 | Hmu1294 | hla2635 | NP2902A |
1589 | HQ2504A | 2046 | 1457 | 1553 | 1431 | 1383 | 1418 | 1471 | 1370 | 1341 |
1687 | HVO_1164 | 1457 | 2014 | 1601 | 1448 | 1453 | 1432 | 1474 | 1374 | 1440 |
1653 | Hbo0394 | 1553 | 1601 | 1997 | 1461 | 1471 | 1391 | 1467 | 1388 | 1429 |
1592 | VNG0804 | 1431 | 1448 | 1461 | 2260 | 1471 | 1431 | 1460 | 1328 | 1381 |
1638 | Hut0957 | 1383 | 1453 | 1471 | 1471 | 2070 | 1519 | 1550 | 1401 | 1414 |
1654 | rrnAC0521 | 1418 | 1432 | 1391 | 1431 | 1519 | 2029 | 1598 | 1390 | 1387 |
1673 | Hmu1294 | 1471 | 1474 | 1467 | 1460 | 1550 | 1598 | 2039 | 1442 | 1439 |
1585 | hla2635 | 1370 | 1374 | 1388 | 1328 | 1401 | 1390 | 1442 | 3308 | 1504 |
1594 | NP2902A | 1341 | 1440 | 1429 | 1381 | 1414 | 1387 | 1439 | 1504 | 2053 |
447 symbols consensus MSDAAD--------------------------DTG--GR--------------------- #oth 14644353222222211111111111111111464432.111111111111111111111 HQ2504A :AKSGSV::::::::::::::::::::::::::VE::D:::::::::::::::::::::: HVO_1164 :::TE:T:::::::::::::::::::::::::LN:::::::::::::::::::::::::: Hbo0394 :AEVT:::::::::::::::::::::::::::-D:::::::::::::::::::::::::: VNG0804 -MS::PAPGVCTRFPRRLFPGSHPTLPEMTQP:QSNPT:::::::::::::::::::::: Hut0957 :T::T:AGG:::::::::::::::::::::::NE:SA::::::::::::::::::::::: rrnAC0521 ::VDRP:::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1294 ::NDESL:::::::::::::::::::::::::::R::::::::::::::::::::::::: hla2635 ::A:GHRRSRIAGDR:::::::::::::::::R:CRA::GSSGTGSPLPPSDGSRAFFRE NP2902A :DE:::::::::::::::::::::::::::::-SCAT::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HQ2504A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1164 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0394 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0804 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0957 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0521 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1294 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2635 EPRRCRRRRAAFGRGSGHTTVCAFGSLIDCASGGNCRSAAPHRFDERLAVARRQRPQSSI NP2902A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HQ2504A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_1164 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo0394 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG0804 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut0957 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC0521 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1294 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla2635 TDIHLYVRRVFFYPMTDPADAGVDADPEDHESDTVRDPETDTVRDPDIDVNPDIDISPDA NP2902A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ---IYDPEADHAFPDERLNEVLDRILSDEEITAYLEAQNVNPVTRKGYNDHGAKHIEIVR #oth 1117.2.243.1..1111.31.35234.311211.5...1.1.2.12.....5..13..1 HQ2504A :::Q:::DD::N::T::::V::PE::::P:::T::Q:::::A::::::::::T::::::: HVO_1164 :::V::::::::::::K:::::PVL:D:::V:TL:::::::A::::::::::P::::::L Hbo0394 :::K:::::S:N::::K:::::PTL:D:P:VKT::K:::::A::::::::::E::::::: VNG0804 :::A:::AQS:::::G:::D::EYV:N::AV::::T:::::::::::::::::::::::: Hut0957 ::::::::GA:::::::::A::EYVRE:A::Q:::S::::::::::Q:::::E:::T::: rrnAC0521 :::::::::::::::G:::A:::TVTT::::Q:::::::I:::A::R:::::::::G::: Hmu1294 :::R:::D:::::::::V:D::AA:E::T::Q::::::::::::::R:::::::::S::: hla2635 DRHE:H:DRE::::::::::M::::E::P::::::::::::::D::::::::S::V:::: NP2902A :::T:N:::::::::::V:::::::EN::::::::A:::::::D:M::::::R::::::: consensus NRALRLYDLLKAGGVEFNGAREQGLDEADEAVIIALAATLHDIGHVVHRDDHPYYSIPLA #oth 11..2..2...42223.1..321..312..2..1...11...1..1...14.1...1... HQ2504A :::::::E:::TSNI:::::T::::SG:::P:::::::::::V:::::::K::::::::: HVO_1164 ::::::::::::::C:::::A:::::::::P:::::::Q::::::I::::N:A::::::: Hbo0394 :::::::::::::D:D::::SQ:::A:E:::::V:::::::::::I::::E:A::::::: VNG0804 :::::::A:::R:::P::::TD:::S::::P::V::::::::::::::::::A::::::: Hut0957 ::::C::::::E:::T:::::::::::S::P::V:::::::::::::::::::::::::: rrnAC0521 ::::C::::::QA:::::::ADH::::::::::::::T::::::::::::S::::::::: Hmu1294 ::::C::::::R::I:::::S::::E:::::::V:::::::::::::::::::::::::: hla2635 D::::::::::::::::::::Q::::::::S::::::::::::::::::H:::::::::: NP2902A :A::S::::::::::::D:::Q::::::::::::::::::::::::::::::::::L::: consensus ADLLDRFLPE--FYDIAEAVRIKAEVLHAILCHHTEEDPLTLEAGVVRVADALDMERGRS #oth 1.2..12.35231.14433.13.1.1.......121.4...3...11.1..1....2... HQ2504A ::I::::::QFD::::EQQ::M:::I:::::::::A:::::T:::II::::::::::::: HVO_1164 S:V::::::::::::L:D::::::::::::::::R:::::::::::I::::::::::::: Hbo0394 :::::::::Q:::::TS:V::M:::::::::::::::::::T::::I::::::::::::: VNG0804 ::V:::I::::::::P:D:::V:G:::::::::::::T:::T::::I::::G::::H::: Hut0957 ::::::I:ADLP:::V:A:::V:::::::::::D:A:K:::V::::::::::::::S::: rrnAC0521 ::I::DL:D:::::::RQ::Q::G:::::::::::::N:::::::::::::::::::::: Hmu1294 :::::D:::A::Y::TEA:::V:G::::::::::::::::::::::::::::::::S::: hla2635 :::::D::SS::::GVP:Q::::::::::::::::::Q:::R:::I::I::G:::::::: NP2902A ::I:::::DGLGY::P::T::L:G:I::::::::S::Q:::R:::I:::::::::::::: consensus RIPYEKGGRGINTLSSQAIERVSLQPGDDKPVLVEIEMNNAAGVYQVDNLLKAKLHDSGL #oth .2..24.....1.2..1..45.5.45.336112.2.2.61........2...2.153.21 HQ2504A ::::K::::::D:::::::D:::::S:S:C::::K:::I::::::::::::::::R:::: HVO_1164 ::::::::::::::::R::KD:V:K::EESA:::::::L::::::::::::::::DG::: Hbo0394 :::::::::::::::::::DN:::K::T::::::::::V:::::::::::::::::N:R: VNG0804 :L:::R:::::::::::::S::A::E:::A::::::::Q:::::::::::::E:::R::I Hut0957 :::::H:::::::V::::::A:H:RT::GV::::::::T:::::::::::::::::N::: rrnAC0521 ::::KR:::::D:V::::::T:T:SL:::Y::::::A::::::::::::::::::K:::: Hmu1294 ::::NH:::::::V:::::K::F::D::::::::::::S::::::::::::::::QG::: hla2635 :V:::E:::::::V::::::::::RE:EET:AQ:V:W:::::::::::S:::::IEG:L: NP2902A :::::Q:::::::I::R::TS:A:C::EST:AM:::::TD::::::::E:::H::D::RI consensus EDHVRIVAVNTRED-D---QLVERIEL #oth 1362.1..2.24424211141111... HQ2504A QEY:::::::::GG:::::::::Q::: HVO_1164 :::::::::::KS::::::R::::::: Hbo0394 ::LI:::::::KAE:S::::::::::: VNG0804 ::D:::::L:STGEG::::A::::::: Hut0957 :ERL::::I:::::T::::RI:::::: rrnAC0521 :E::::::L:::::GN::::I:::::: Hmu1294 :PY:::::L:I:::E:::::::::::: hla2635 ::EI:T::I::HR:D:GNGSI:D:::: NP2902A :SF::::::::DRGE::::-:I:::::