|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 1608 | hla1755 | hla1772 | hla2405 | VNG6430 | pNG5042 | rrnAC0369 | rrnAC0544 | NP4638A | rrnAC3387 |
959 | hla1755 | 1656 | 1656 | 1205 | 665 | 743 | 743 | 743 | 863 | 840 |
959 | hla1772 | 1656 | 1656 | 1205 | 665 | 743 | 743 | 743 | 863 | 840 |
787 | hla2405 | 1205 | 1205 | 1408 | 543 | 606 | 606 | 606 | 674 | 654 |
1163 | VNG6430 | 665 | 665 | 543 | 1401 | 1142 | 1142 | 1142 | 842 | 874 |
1381 | pNG5042 | 743 | 743 | 606 | 1142 | 1619 | 1619 | 1619 | 937 | 918 |
1381 | rrnAC0369 | 743 | 743 | 606 | 1142 | 1619 | 1619 | 1619 | 937 | 918 |
1381 | rrnAC0544 | 743 | 743 | 606 | 1142 | 1619 | 1619 | 1619 | 937 | 918 |
1082 | NP4638A | 863 | 863 | 674 | 842 | 937 | 937 | 937 | 1610 | 1167 |
1101 | rrnAC3387 | 840 | 840 | 654 | 874 | 918 | 918 | 918 | 1167 | 1611 |
212 symbols consensus MAENARLSGGIDWIDLDFVERERTPRLAMKLGIQLHLAGLSLSNTVSVLEIFGVQRSRSA #oth 13233213343221213211122114521211.12.1..1..211235..42.13.1121 hla1755 :::FD:::E::A::::S::::D::::W:IEV::RC::::M::REVSKH::R:::D::HV: hla1772 :::FD:::E::A::::S::::D::::W:IEV::RC::::M::REVSKH::R:::D::HV: hla2405 :S:FD::ND::A::::S::::D:::LC:IEV::RC::::M::CEVSKF::EY:ID::HV: VNG6430 ----------------------------:::S:::::::::::::::I::::::E:A::T pNG5042 :PK::G:G:S::Q:::::::::A::::L:::S::::::::::::::::::::::::A::T rrnAC0369 :PK::G:G:S::Q:::::::::A::::L:::S::::::::::::::::::::::::A::T rrnAC0544 :PK::G:G:S::Q:::::::::A::::L:::S::::::::::::::::::::::::A::T NP4638A :::I:::::RS:::E::V:::::::SEL:::::R:::::::::::IRE::K:::N:::K: rrnAC3387 :::IT::::CR:::::G::::::::EP::A::::S:V:::::::::EL::DL::::::K: consensus VHNWVHKADLQPISGQSPDHVAVDETVIRLNGQQFWLYAAVDPQTNELLHTKLRPTTTKV #oth 111..1...1..4124.2112.1..11.1112111...1.11.31.111.32.32.2.23 hla1755 I:::::::::::::TV:A:QL::::KM:::H:::::::G::::Y:::I::VS:Y:::::Q hla1772 I:::::::::::::TV:A:QL::::KM:::H:::::::G::::Y:::I::VS:Y:::::Q hla2405 I::::::::R::::TV:V:QL:::::M:::H:::::::G::::Y:::IF:VS:Y::A::Q VNG6430 ::::::::::::E::R:::::::::::::::NE:Y::::::N:E:::::::::E::R:N: pNG5042 :Y::::::::::KD::::::::::::::Q:::ERY:::::::::::K::::::::::::: rrnAC0369 :Y::::::::::KD::::::::::::::Q:::ERY:::::::::::K::::::::::::: rrnAC0544 :Y::::::::::KD::::::::::::::Q:::ERY:::::::::::K::::::::::::: NP4638A ::D::Q::::::ADDA::::I:L::::::I:::::::::::::D::::::LR:FT:::TA rrnAC3387 ::D::Q::::::D::K::NQI:L::::::I:D::::::::A:::S:::::IR:FA:::TT consensus LARAFLTELHQKHDVDDAVFLVDGARSLQAVLQRHGLRFRYERHGNRNAVERVFREIKRR #oth 2134.122.3211212112....2333.3311212.31.1432.....11..1.111111 hla1755 TT:W:::D:::RYRLN:VE::::D:DY:GP::AED:Y:::VI:::::::I::::W::E:: hla1772 TT:W:::D:::RYRLN:VE::::D:DY:GP::AED:Y:::VI:::::::I::::W::E:: hla2405 T::W::::::RRYQL::VK::::DVDY:GP::AED:C::QIIQ::::::I::::W::E-- VNG6430 I::S:FAK:RE:::::T::::::::PT:KDAC:::::::Q::K:::::T::::::::::: pNG5042 ::H::::::SE:::::::::::::S::::::C::::FD::::K::::::::::::::::: rrnAC0369 ::H::::::SE:::::::::::::S::::::C::::FD::::K::::::::::::::::: rrnAC0544 ::H::::::SE:::::::::::::S::::::C::::FD::::K::::::::::::::::: NP4638A :TQT::R::Q:::::E:::::::YTQH:ATA:R:A::::QTV:::::::::::::D:::: rrnAC3387 :TEI::R::R:::::ET::::::::QH::TA:::A::::QMS::::::::::I:::L::: consensus TSSFSNCFSNAEAETADDWLRSFAFAWNQLI- #oth 13212121122333113312421233213331 hla1755 ::::A:S:::VAL:::QN::EA::VYH:SRQT hla1772 ::::A:S:::VAL:::QN::EA::VYH:SRQT hla2405 -------------------------------: VNG6430 :::::::::::A:D:::::::::S:::::::: pNG5042 :VC::::::::::::::::I:::S:::::::: rrnAC0369 :VC::::::::::::::::I:::S:::::::: rrnAC0544 :VC::::::::::::::::I:::S:::::::: NP4638A :P::::S::HVQPT::EI::QA::VW::S:N: rrnAC3387 :::::::::HV:P:::EN::L:::RWH:ATN: