Home |  Text search
[S] (-) COG3356 Predicted membrane protein
8 genomes BUD0922 8 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG0230

rrnAC1696

HVO_0648

Hbo0879

Hmu0614

Hut0079

-

NP0618A

HQ1288A

Pairwise sequence scores
Consensus score4560 NP0618A VNG0230 HQ1288A HVO_0648 Hbo0879 Hut0079 rrnAC1696 Hmu0614
2823NP0618A 4488 2419 2346 2429 2244 2472 2471 2370
3345VNG0230 2419 4617 2832 2955 2826 2923 2911 2773
3377HQ1288A 2346 2832 4652 3327 3180 2857 2758 2685
3699HVO_0648 2429 2955 3327 4713 3497 2963 2969 2808
3523Hbo0879 2244 2826 3180 3497 4423 2733 2840 2887
3461Hut0079 2472 2923 2857 2963 2733 4583 3188 3009
3554rrnAC1696 2471 2911 2758 2969 2840 3188 4582 3234
3333Hmu0614 2370 2773 2685 2808 2887 3009 3234 4357

642 symbols
consensus       MTTTQGNLAGLSRFIFRAPRWYSSLAFALVIAAMAGVAAFDSG----------FILDDAW
#oth            12521331141122211114124134233231142.12....233232111212214..1
NP0618A         :SNS:RD::A::::V::::D:SA::FLT:LV::V::::::::::::::::::::V::::Y
VNG0230         ::E:::E::S::KY::::::::::V:LS:::::L::::::::Q::::::::::YV:A:::
HQ1288A         :::::SE::N:::Y::::::::V::T::I:V::AV::::::::AYATTWRGLFIFGR:::
HVO_0648        ::S::SD::::::::::::S::T::G:::LV:::::IG:::::DLAGSWRGIF::GR:::
Hbo0879         ---------------------------------::::G:::::ESMQTWRGLF::GK:::
Hut0079         :::::::::::::Y::::::::::IG::VL:::IV:::::::R::::::::::Y::E:::
rrnAC1696       ::A::::::S:::::::::T::T:::::::::::T:IV::::R:::::::::::::::::
Hmu0614         ------------------------VT::::L::VT:I:::::R:::::::::::V:::::

consensus       QGVFFIGIPTVVAAFGTPGVDRFLGGQLTPNRSSLLALACELIVVTILTGAAVISVFTG-
#oth            2.2121.2..33.233.34..163..3..31.12...252.223124314.242223131
NP0618A         L:MVYV:V:::I:::L::W:::P:::R::Y:::A:::FL:::L::VAIVV::AAVAV:::
VNG0230         :::::::V::A::SMA:TT:::HF:::::Y:::::::V:::IV:::V:VA:G:AAIL:PR
HQ1288A         E::::::::::::::A:T:::::V::K::A::::::::IS:::L:::VVT::::::I:::
HVO_0648        E:I::::::::::::::T:::::V::K::H:::::::::G:V:I::F:::::IV::::::
Hbo0879         E:I::::V::::::V::S::::YV::T:::::::::::V::I:I:::V:I::T:::::::
Hut0079         ::I:Y::L::LA:GVL::P:::LI::::::S:A:::::G:::L:IA:M:::SLV:AVAP:
rrnAC1696       ::::L::L::SI:SAV::W:::Q:::::::::AT:::VI::::TIAM::I:G::A:::VR
Hmu0614         :::::V:::::L:SV::AY::NA:::::::::A:::::F:::::IAFVV::G:V::L:A:

consensus       LGQNFVFDALVVALASIFAFRLLVVMAVSRSSLLVAAIPASIQTLAAAVLLFVYSGTLRF
#oth            121411212.231..22..1.11122....32.321221..2.122111.1121211343
NP0618A         ::AGAIVG::::S:::M::V::F::L::::Q::P:::::::::PV:::::V:LH:DAA:H
VNG0230         :S::::::::IA:::LV::V:F:::L::::NT:A:SVL::::::AT:G::::::G:::NY
HQ1288A         :::R:I:::::::::::::::::I:::::::::VI::L:::::::V:::::::::::::Y
HVO_0648        :::T:I:::::I::::V::::::I::::::::::I::V:::::::TS:A:::::::::::
Hbo0879         :::R::::::::::::V::::::::::::::::::::::::L::::::::::I:::::T:
Hut0079         ::::::::::LF:::A:::V::::I:::::HR:A:::V::::::V::::::::::::M:Y
rrnAC1696       ::::::::V:L::::::::::::IL:::::H:::K:T::::V::VT:::::AI:::ATA:
Hmu0614         FD:E::L:S:L:S::A:::::::::I:::::::P::::A::::PA:::A::A::T::TSA

consensus       LELGGPIL---LRPYLARPDRAPPELQ-AIAPEDFALLAATCVIYALAVYGFLVVIDRPW
#oth            3453225232232511312341112231335251.52.333223.142113.2242.2..
NP0618A         :GFAPAADIPFVGTF------:A:V:D::VR:V:::::L:L:AV::V::::::IA:::::
VNG0230         VTS::GS:::::GAF::::SH::::I:Y:F::R::L::V:MTAL:GSVA:::V:::::::
HQ1288A         ISF:::L:DAYMM::::::E:::A::S:::SM:H::::GI:S:L::::::::II:V::::
HVO_0648        F:V:::::DAY:M:::::::::::::S::::LSH:Q:::I:::M:::G::V::RI:::::
Hbo0879         :SD:::::NAY:::::V:A::::A::S:::S:DH::::GV:::::::G::A:I::V::::
Hut0079         ::I:::L-:::A:S::S::EQ::A::L:V:L:N::FV::LL:G:::I::WL:::T::W::
rrnAC1696       I-:ED:M-:::::E::S::EEV::QV::GFI::::II::VI::::::::WL::::::Q::
Hmu0614         :-:DD:T-:::::RF:S:::Q:::::::FLQ:V::GV::LM::L::G::WL:::LL::::

consensus       RRSLGVSVLDFIRGFIGHIAEGSRELEEFFEQLGEEALVPVTVLSFRR-PDGTEKARFVL
#oth            111.1..2...23.....1.1.12...2..111.11.21..12.112313124.....11
NP0618A         :::::::::::V::::::::D::T:::S:::E:::T:V:::SA:VV:Q:::::::::::A
VNG0230         Q:::::::::::G:::::::::T::::D::::I::::V::::::::::TS:E::::::::
HQ1288A         ::::N::M:::L::::::::::::::::::Q:::::::I::S::::KT:L:DV:::::::
HVO_0648        ::G:::::::::::::::::::T::::D::::::Q::I::::::::E::D::::::::::
Hbo0879         ::::::::::::::::::L::::::::::::::::::I:::::::::S:SA:-:::::I:
Hut0079         :::::::A:::LE::::::::::N:::::::EI::::::::S::V:::::::D:::::::
rrnAC1696       :S:::::A:::L::::::::::T::::::::EI::::V::::L::V::::::E:::::::
Hmu0614         :S::::::::::Q::::::::::::::D:::E:::::::::::::V::::::E:::::::

consensus       PMIHPGPMGEIGGGNLPERVAERADGLAFPPHATAGHDFNLVTEREVDTILDAADDAHER
#oth            ..1......1.....1.4.215323..3..1.1............1.142221134.344
NP0618A         ::V::::::D:::::::A:LD:::S::S::L:G::::::::::::A:EPVV::V:::V:A
VNG0230         :::::::::::::::::Q:::DAT:::::::::::::::::::::::::LV:::A:::D:
HQ1288A         :::::::::::::::::::::TA:N:::::::::::::::::::::::::I::VET:AN:
HVO_0648        :::::::::::::::F:::::R::E::V::::::::::::::::::::VV:::::::Y::
Hbo0879         :::::::::::::::F:::::S:S:::::::::::::::::::::::::::E:::A:::Q
Hut0079         :::::::::::::::::K:I:QE::::G:::::::::::::::::::E::::::ER::D:
rrnAC1696       :::::::::::::::::R::::S:::::::::::::::::::::::::K::ST:ET:YQN
Hmu0614         :::::::::::::::::K:::TE:::::::::::::::::::::::::S::S::RS:YRE

consensus       IEYTDEATASVRVTEGEATLLGQAFGDDALLVSTYAPGFADDIEYAVGLSAAAEARAAGL
#oth            2225451.5341333.11213..3212212323.21.32...1211...1.33.1.3322
NP0618A         AGEHEA::GAR:T:V:DS::V:::V::G:FA:I:H::EP::::AFG:::A:TG:L::::F
VNG0230         :T:::T:::P::A:D:::::F::::D:::F:::::::N:::::S::::::::::::V:::
HQ1288A         :::AT:::R:::THS::SSM:::CI:NNG::I:::::::::::A:G:::::S::::TT::
HVO_0648        :::SPDV:E::::QS:D:KM:::R:::::::::::::Q::::V::::::::S::::TT::
Hbo0879         :::GS:::Q:IQ:QS:::KM:::G:::::V:::::::N::::V:::::::::T:::T::I
Hut0079         ::::ET::PGE:LE::::::T::::::N::ATV::S::::::::::::::::::::NGH:
rrnAC1696       :::DSQ:::GH:::::::::T:::::S:::V:N:::::C:::V::::::::MS::::D::
Hmu0614         L:F::R::::R::E::D:S:::::I::::VI:::F:::::::V::::::::::::::GS:

consensus       ENVLLVDAHNCNNGLEGDDLGHVTPGSERSFDMIHAAGQLGEALSAAERGQLRLGVAWDE
#oth            332111....1.2.14.231.112..14.1112241.253144.3313424123.1.321
NP0618A         :TA:VA::::::-:QV::GP:Q:::::R:AG:IQS:::E::A:::::DS:P:SV:::AS:
VNG0230         :T:::A:::::::::D::::::IY:::::::QL:Q:::SAARD:AD:PEHA::M:::::P
HQ1288A         S::M::::::S::::S:PT::::::::A:A::::S::R:C:DR::T::QYPME::T::A:
HVO_0648        RD:::::::::::::Q:P:::::::::K::::::T:::LA::E:::SS::S:S::T:F:P
Hbo0879         ::::::::::S::::D:P::::I::::K::::::T:::LG::::TS:S::D:SM::::::
Hut0079         SEIMV::::::::::::EN::::V::G:::::L::G:DR:::R:E:::Q:S::::T:H::
rrnAC1696       DD::::::::::D::::::::::V:::Q:::::L:G:::::SL:TD::T::::C::::::
Hmu0614         DEI:::::::S:D::::E:::::V::::::::::DG::K::AE:A::D:::::C::::::

consensus       TPWKPRDGIGPLGIRVAVFEVAGQRTAYVLIDGNNMEPGLRERIVDALDG-----ADTAE
#oth            .2.6.41......1..113314242.....1.....1....331332354332222.53.
NP0618A         :D:::T:::::::V:::::DTD:D::::::V:::::V:::::::Q:::A-::::::::V:
VNG0230         :D:Q:C:::::::V::::V:TGTT:::::::::::::::::::LL::VG:LG:::I:H::
HQ1288A         :::D:T:::::::V::::LK::DNE:::::V::::::::::GQ:IE:IVDEGP::V:A::
HVO_0648        :D:T::E::::::::::ATT:GD:T::::::::::::::::D:::EG:TTGPNAK::V::
Hbo0879         :E:V::E:::::::::::T:::::T::::::::::::::::DD::SD:T:GENPL::V::
Hut0079         :::G:Q:::::::V::::VD:D:GT:::::V:::::::::::E::::I:Q:::::V:LL:
rrnAC1696       :::::EE:::::::::C::::ND::::::::::::::::::Q::I::AE::::::V::M:
Hmu0614         :::E:QE::::::::::::::E:T:::::::::::::::::GD:LA:::::::::I:D::

consensus       VMTTDTHIVNTVEAENQVGAAIDGDELIALIDELTDEALADLEPVEAGMASERAEVTVFG
#oth            21.1...1.....14.1..33126332332255.244.33.411.21.11213131.1..
NP0618A         :A:::::V::::::T:R::D:L:::::V::VQS:EAD:T::::::V::VG:AE::T::::
VNG0230         :::::::::::::SS::::::::WGA:TDVVVA::EA:TD::D:::::V:T:::::::::
HQ1288A         I:::::::::::::N::::S:::N:IF:NTLS:::T::RR:Y:T:TG:::V::VS:::::
HVO_0648        :::::::::::::::::::::::H:::RET::R:V::::::T:::V::::T::::::I::
Hbo0879         A:::::::::::::D::::::::QG:IRE::V:::R:::S:V::::::::V:::::::::
Hut0079         :::S:::V:::::::::::DE:P:ED::DV::G:V:A::D::::::::::::K:K:::::
rrnAC1696       :::S:::::::::::::::QV:SEK:IV:::GD:V:R:I:::::::::::::Q:T:::::
Hmu0614         :::::::::::::::::::SS:PD:::::::A:::EQ:ID:I::::::::::K:T:::::

consensus       NDRTETLASHANAVVSMGGALAVAFILAVMAVSLLIFLLT--
#oth            2........1..11122..1213533222311.222112111
NP0618A         T::::::::T:::M:QL::V:LLVVVG::LT::::VV::AG:
VNG0230         ::::::::::::::IA::::V:GLAV::TVTI:V:V:F::::
HQ1288A         S:::::::::::::::I:::F::TVA::AI:::VV:::FA::
HVO_0648        ::::::::::::V:::::::::L:L:::A::::::V:F:A::
Hbo0879         :::::::::::::::A::::F::SVT::A::::I::::F:::
Hut0079         T::::::::T::::::::::::GM:VF::V:I:::L::::::
rrnAC1696       :::::::::T:::M::::::::A::::I::T::V::::::::
Hmu0614         :::::::::T::::::L::::::T:::T:LT::IG:::V:GG