|
Pairwise sequence scores | ||||||||
---|---|---|---|---|---|---|---|---|
Consensus score | 2237 | hla1156 | VNG1099 | rrnAC2099 | Hmu1741 | HQ2279A | HVO_2327 | Hbo2011 |
1600 | hla1156 | 3634 | 1320 | 1402 | 1304 | 1285 | 1467 | 1414 |
1638 | VNG1099 | 1320 | 2274 | 1411 | 1384 | 1304 | 1431 | 1548 |
1854 | rrnAC2099 | 1402 | 1411 | 2256 | 1709 | 1658 | 1484 | 1602 |
1796 | Hmu1741 | 1304 | 1384 | 1709 | 2225 | 1741 | 1409 | 1531 |
1732 | HQ2279A | 1285 | 1304 | 1658 | 1741 | 2225 | 1414 | 1496 |
1687 | HVO_2327 | 1467 | 1431 | 1484 | 1409 | 1414 | 2185 | 1562 |
1836 | Hbo2011 | 1414 | 1548 | 1602 | 1531 | 1496 | 1562 | 2243 |
459 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla1156 VEPERDRPGLVVEVDEPLLIALDDVLDRVLDLGGRVPGEVVERHLAVPTDGRSVERKPVA VNG1099 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2099 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1741 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2279A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2327 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2011 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 hla1156 HGDVRLLVERELVQPECVRAEPVRDRRLPVLRAVVVRPSVGQHVQQDDHGTVVRGGRVGF VNG1099 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2099 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu1741 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ2279A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_2327 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2011 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -------------------------------------------MNEPGV-GVLQDQATLA #oth 1111111111111111111111111111111111111111111.12433115131.4123 hla1156 GIGHVCFTVLPGEKTAGAGGDGDRFPTGGDQRKPKARLFPTNR:::::TE:::L::K::H VNG1099 :::::::::::::::::::::::::::::::::::::::::::::::EL:QAVV::Q::: rrnAC2099 ::::::::::::::::::::::::::::::::::::::::::::TDAV:::K::::E::: Hmu1741 ::::::::::::::::::::::::::::::::::::::::::::TDRI:::E::::::VE HQ2279A ::::::::::::::::::::::::::::::::::::::::::::TNCI:::N::::::VE HVO_2327 ::::::::::::::::::::::::::::::::::::::::::::::S:H:Q::ME:DV:R Hbo2011 ::::::::::::::::::::::::::::::::::::::::::::::::::QS:V::E:M: consensus ARVEAGDAPDWVRAHWETFREGLLGERNGTPFPCFFGAESVRNGDPLYTAVPSMTDKDAL #oth 3.12412412.244.23..21321.1.112....2..111112.121.1213.21112.. hla1156 D:LD--:::G:LQD:YR::::SM::::DDS::::Y::I:VE:E::L::A:CE:T::PA:: VNG1099 D::A:::Y:::::S:::::S:SVT:D:D::::::H::::::A::E::::V:::L::P::: rrnAC2099 ::::R::::E::G:::R::::::T:::::S::::::::::::D:E:::::::::S:P::: Hmu1741 E::AS:ATT:::VD::T:::D::::::::::::::::::::AD::::::::::::::::: HQ2279A E:::S:A:::::T:::N:::D:::::::DA:::::::::::A:::::::::S:::E:N:: HVO_2327 H:LDD::L:::A:K:Y:::::TM::D:D:A::::Y::I::E::::A:::F:D:::::::: Hbo2011 ::::::EM:::AVR:F:::TDA::::::::::::::::Q:::D:E:V::::::::::::: consensus LDLRDTLLEYLDTYQDHSDRASLVTFFKPPERELSEADYHEALWHILQFLHVHDPEPWPE #oth 141122.13..24141333131112.11..24222.23..12..12.21...1.12...3 hla1156 :R:::V:V::::A:A::A:::P:AV::R:::GDPG:SH:::R:::V:E:::::::::::D VNG1099 :GF::A:::::TEHG:RDA:V:F:::W::::D:F:::::::::::::SV::::::::::A rrnAC2099 F::GQ:::K:::::::::E::::::::R::::P:T::E::DR:::::::::::::::::: Hmu1741 :::GR:::Q::::::E::::::::A:::::::::T::Q::::::N::::::::::A:::: HQ2279A :N:GR:::S::EI:::Y:::::::V::R::NQ::::GE::::::::::::::::TK:::K HVO_2327 :A::::::::::V:P:Y:EAC:::::::::AADFT::::::R::::::::::N::::::A Hbo2011 ::F::A::::::V:R:LPG:T:F::::::::::F::G::::I:::L:::::::::::::: consensus DIPTDPDDPHWEFCFGGEPMFPTCRAPFY--DERKSRYCPVGLEITFQPRALFE--GITA #oth .1..11.2.31..1...1.2...2.....1123.2...1.2...1....121.12222.1 hla1156 :::::::T:RF::::::::L:::S::::::::::::::S:::::V::::::V:D:::L:: VNG1099 :V:::T:S:G:::::::::L:::::::::AAHD:Y::::::::::::::AG::::::::: rrnAC2099 :::::::::::::::::K::::::::::::::T:::::::::::::::::::::DLNV:: Hmu1741 ::::E::::::::S:::::I:::::::::::EG:::::::::::::::::::::DM:V:: HQ2279A :::::::::::::S::::::::::::::::::T:::::::I:::::::::::::NLRV:: HVO_2327 :::::::::T:::S:::::::::T::::::::::I:::::W::::::::::::D:::::: Hbo2011 ::::::::::::::::::::::::::::::::::::::::::::::::::T::D:::::H consensus DTEAGQHARETIQNRLEEYDGVCPHADLGDWGVEGDREWPQYMFSEDDDQAPDECPISIT #oth ..21.13..33.14.212...1.....1..1..12....2..1112.2521.21..244. hla1156 ::::::::::::RE:MG::::::::::::::::::::::T::L:R::::AS::I::L:P: VNG1099 ::D:::R::AA::::I:::::Q::::::::L::D:::::V::L:R:::A:::T:::ATF: rrnAC2099 :::::::::DV::G:::::::::::::I:::::::::::::::L:S:ENAS::::::TV: Hmu1741 :::::E:::GI::D:::G:::::::::::::::::::::::::L::::R:::S:::::T: HQ2279A ::AM:ER::::::D:::D::::::::::::::::E::::::::::S::K::::::::N:: HVO_2327 ::::::Q::AV::::I:::::::::::::::::::::::::::::A:ES::::::::R:: Hbo2011 ::::::K::::::S:M::::::::::::::::::S:::::::L:R::P:DS::::::V:: consensus REHPKAPALL---------------D----ERPAASADD #oth .11..2453411111111111111122221455465322 hla1156 :N::::::A:LEPGAWRRLAESPAP:DDAGSVI:GTG:: VNG1099 ::::::T:GI::::::::::::::::PVVGSQ:P::G:: rrnAC2099 :::::SKW:V:::::::::::::::-:::::T::PEPA: Hmu1741 :::::STQ::::::::::::::::::::::A:ESVGHPN HQ2279A ::Y::SNR::::::::::::::::::::::DENLL:PPA HVO_2327 :::::V:TA-:::::::::::::::-::::-----P::: Hbo2011 ::::::ASQR:::::::::::::::T::::::TPKA:::