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[S] (-) COG3430 Uncharacterized protein conserved in archaea
3 genomes BUD2380 4 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG1974

pNG4035

rrnAC1743

- -

Hmu2332

- - - -

Pairwise sequence scores
Consensus score1228 rrnAC1743 pNG4035 VNG1974 Hmu2332
557rrnAC1743 1198 359 336 316
697pNG4035 359 1247 452 424
795VNG1974 336 452 1277 595
826Hmu2332 316 424 595 1308

191 symbols
consensus       ------V-A-VLMVAIVVILAATVAVFVLGFAEDANNPAPLVGQSSGELVAGTAGD-GNQ
#oth            11111112121111112.2..1.12212.1222233312.311111.2112223.12132
rrnAC1743       ::::::-:-:--:LS:T:L::G::GGV::TASS:L:QRT:T:AR:T:DF:T:PS:GC:LN
pNG4035         ::::::-:-:--::::A::::::I:T::::::::VD::::S:::T:::F:::--::RDQ:
VNG1974         MRAATS:T:V:::::V::V::G:::::T::STDTISS::::I::T:::::RD:::G::D:
Hmu2332         :::::::V:N::L::V::::::::S::A:::::E:TK:G:V::::::T:E:N:V:::::G

consensus       IVRITHVAGDRVAVDELEVVVDATD-ACGKRARIVDLPVS---GKALGPSNIDG-DDLID
#oth            2.111.21..3111322112.21221222231.1.1..22112232122211112.2111
rrnAC1743       T:S:R:AG::P:PA:::::A:ALP::---SD:::::::::::::T::AA::::DP:N::Y
pNG4035         V:::::::::S:::ENI:II:R:SGPGVDTE::L::::ST::ASSK:LNE::::N:::::
VNG1974         :::L::I:::D:::SD:D::::::A:::::::::::::T::::--T::::TY::::K:F:
Hmu2332         :::L:::::::IP:P:M:::::::::::::KG:L:N:::DRYG:::I::A::E::::IF:

consensus       -RSYSPDGGADDGADRG--WSAGETITFRINAG-----DCTIDAADEIEVRVVHTPSESV
#oth            212123213222233312112112212.122321111111233312111.11.1111122
rrnAC1743       :-D:CVG:VIAN:GQ:-::::::RA:::QL::::::::GG:VGPG:T:::::::V:TNG:
pNG4035         Q::G:TKLI::::T:V-:::::::::E::V:S:TADFR:GETP::N:L::DI:YVD:::S
VNG1974         :-F:::::::F:ANTD:V::RP:::A::::ANR:::::::SL:SG:T:T:::::::::T-
Hmu2332         E:::NS::TP:EN:IH:SEYT:SDQ:A:::PDT:::::::::EK:E::T:::::::T:::

consensus       AATIELTARA-
#oth            332312.2132
rrnAC1743       L::V:::::R:
pNG4035         :TLF:E:F:P:
VNG1974         -VV::D:LT:S
Hmu2332         PI:KT:::TSQ