Home |  Text search
[G] (MalK) COG3839 ABC-type sugar transport systems, ATPase components
5 genomes BUD1641 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG6281

rrnB0315

HVO_B0295

Hbo2908

Hmu0326

- - - -

Pairwise sequence scores
Consensus score2824 rrnB0315 VNG6281 Hbo2908 HVO_B0295 Hmu0326
1938rrnB0315 2839 1623 1596 1684 1688
2082VNG6281 1623 2866 1723 1848 1887
2086Hbo2908 1596 1723 2867 1807 1906
2334HVO_B0295 1684 1848 1807 2796 2050
2357Hmu0326 1688 1887 1906 2050 2842

386 symbols
consensus       MSDITLQDLRKQYDDVAAVKGIDLEIQDGEFLVVVGPSGCGKSTTLRMIAGLEDATDGTI
#oth            .231212212.411214..11...323111.111.............11....22.3.11
rrnB0315        :T:V::::V::EF:G:V:::N:::Q:P::A:VT::::::::::::::L:::::Q::::::
VNG6281         ::T:::T::T:H::SI:::D::::DVL:E::::::::::::::::::L::::::::A:::
Hbo2908         :TH:E:DT:T:YFG::E:::::::AV:E:::::L:::::::::::::::::::SI:E::L
HVO_B0295       :::::I:N:::T::::R:::::::::E:::::::::::::::::::::L::::SV:::S:
Hmu0326         :AR:Q:T::E::::::L::::::::A:::::::L::::::::::::::::::::I:S::L

consensus       RIGDTVVNDVPPKDRDIAMVFQNYALYPHMTAAENMTFGMKSAGDFSSDEIDRRVADAAE
#oth            321331.1221.21.11..1............11.11..12.222113311131.21111
rrnB0315        QM:NQD:TG:E:::::V:::::::::::::::RR:I:::::::::::DE::::Q::E::A
VNG6281         :::G:D:T:S::E:::::::::::::::::::::::::::Q:VT:Y::A::ED::::::A
Hbo2908         SF:E:::::L::HE::V::::::::::::::::::::::LD:T:L:RNSGD:E::R:V::
HVO_B0295       A:::R:::E::::::S::::::::::::::::::::K::::::SE::A:::E:::E::T:
Hmu0326         ::D:E::::::::::::::M::::::::::::::::K:::::VS::::::::Q::EE:::

consensus       TLGIADLLDRKPKELSGGERQRVAIGRALVREPEVFLLDEPLSNLDAKLRVQMRAELLKL
#oth            1.1.22.1..1.21..........1...11.1.2...1............13.....221
rrnB0315        V:D:E:::::T:G:::::::::::L::::::D:::::M::::::::::::IK:::::A::
VNG6281         ::::TE::::T:DA:::::::::::::::::::S:::::::::::::::::H:::::S::
Hbo2908         ::::T::::::::::::::::::::::::L:::::::::::::::::::::E::::::EI
HVO_B0295       :::::H:R:::::::::::::::::::::::::D:::M::::::::::::::::::::::
Hmu0326         ::D:::::::::::::::::::::::::I:::::::::::::::::::::::::::::R:

consensus       HRELDTTTVYVTHDQTEAMTLGDRVAVLNDGRLQQVAPPQELYDYPANRFVAEFIGEPAM
#oth            .211211.1................1.121.321..11..3...1.211...1.1.2...
rrnB0315        :S:FG:::I::::::::::::::::V:M::::I:::DS::R:::::ET::::::::D:::
VNG6281         :::::::::::::::::::::::::::::::TV:::::::Q:::F:::Q:::G:::::::
Hbo2908         ::::Q::::::::::::::::::::::::::QVE::D:::L::::::T::::::::S:::
HVO_B0295       ::D:::::::::::::::::::::::::E:::::::::::::::::T:Q:::G:V:::::
Hmu0326         :E:::SS:::::::::::::::::::::DA:E::::::::::::F:::::::::::::::

consensus       NIVPVDVRRRRG--ELVADHPGFSVPLPDGDGLDTAVDSQASLGVRPEDISLASNLA-GD
#oth            .4211313434211222.33311332..214112323133222.1...121.13232133
rrnB0315        :MLS::IIHDGS:::YE:VG:T:R::::E::::E::AGG::L::I:::SL:::DS--:A:
VNG6281         :L:::R::D:PR::G:::::E::AH:::::GSNSAL::RRLTF::::::VL::GRS:T:H
Hbo2908         ::::AEIVSGK:ENGAI:RCD::N:::::AP:::NL:G:::::::::::::::E::P:TQ
HVO_B0295       :F:::A:::Q:S::::::EA::L:LT::A:S:::DVD:DGLT:::::::V::V::T:::A
Hmu0326         :VF::::HE:N:::HY::::A:::IS::::E:::::S::SV:M:::::::::::::P:D:

consensus       AESFTAEVTVTEPLGELLLLHCRLGDDEIRVKVEPRSAISAGDTIELGFDEDRLHLFDA-
#oth            421.3123..1....12..11.23..32241111..24132.1212132.32......23
rrnB0315        RS:::::I:::::::DS:::E::T::QAFKLHA:::T:VEP::QVA:TL:AE::::::PQ
VNG6281         E:::E:R:::R:::::Q:::::TI::::LQ:::Q::RDV:T::::R:C::QQ::::::PE
Hbo2908         TAT:DVTA::::::::S::V::TS::RQLL::A::::S:::::V::V:V:::::::::E:
HVO_B0295       S:::::::::::::::::::::::::E::::::::::R:T::::V::AV:T:::::::::
Hmu0326         ::T:AV:T::R:::::::::::Q::::::H:::::::E:QP:E:::V::::::::::::R

consensus       DGDAIYHS-APEAAQTE----PTVAQ
#oth            2.1.2..1312234432222222333
rrnB0315        T:E::::AA:AQSLEQAGTVDC:I--
VNG6281         T::::::A::S:DQPAK::::::PS:
Hbo2908         ::::V::::::R:E:::QKAP:SQ::
HVO_B0295       ::::V:::SV::R:-::::::SV::D
Hmu0326         S:::L:::T::::TKS::::::V:TE