|
Pairwise sequence scores | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 2802 | Hut2580 | NP3648A | HVO_1707 | Hbo3129 | HQ2543A | hla0066 | VNG0921 | rrnAC0908 | Hmu1588 |
1912 | Hut2580 | 2842 | 1638 | 1625 | 1636 | 1564 | 1685 | 1669 | 1591 | 1654 |
1992 | NP3648A | 1638 | 2904 | 1777 | 1907 | 1787 | 1682 | 1632 | 1660 | 1582 |
1998 | HVO_1707 | 1625 | 1777 | 2940 | 2146 | 1952 | 1539 | 1632 | 1609 | 1647 |
2149 | Hbo3129 | 1636 | 1907 | 2146 | 2833 | 2187 | 1676 | 1722 | 1623 | 1634 |
1996 | HQ2543A | 1564 | 1787 | 1952 | 2187 | 3308 | 1659 | 1606 | 1531 | 1588 |
2019 | hla0066 | 1685 | 1682 | 1539 | 1676 | 1659 | 2920 | 1803 | 1773 | 1792 |
2066 | VNG0921 | 1669 | 1632 | 1632 | 1722 | 1606 | 1803 | 2800 | 1847 | 1871 |
2022 | rrnAC0908 | 1591 | 1660 | 1609 | 1623 | 1531 | 1773 | 1847 | 2820 | 2228 |
2101 | Hmu1588 | 1654 | 1582 | 1647 | 1634 | 1588 | 1792 | 1871 | 2228 | 2821 |
463 symbols consensus M-----SKPDQ---DTRRSTA----------DSATAAPSDTVLELDGVTKEYGAETAVDD #oth 24434345465111553543432232111116446447554.11.212314114131143 Hut2580 VTASQH:T:VD:::AQP:::G::::::::::A:EP:EKGRA::::::::RQF::::::AN NP3648A -:::::-MSSE:::LK:TDQSA:::::::::GP:A::AGQ::::::D:Q:S:DGMDVIR: HVO_1707 :SNSTL:TT:R:::SN:AEATD:::::::::SETDD:DAGG:::::::S:S::T:SVI:: Hbo3129 :N::::-----::::QSA:AS::::::::::::E:RSE:EA::::::LK:S::T::VIH: HQ2543A -::MNS::TT::::E::::P-::::::::::V:DESNHT:E::::CDLQ:H::T::V::H hla0066 :AHTQSV::T:SAG:ASE:P:EANESHAGATE:::D:SP:P::S:S:::::F:P:::::G VNG0921 :AESASRRHAD:::::S::::EF::::::::-----SG::::::::::::::::::::R: rrnAC0908 -:::::-MSR::::TRTQQ:SDFDDV::::::A:V:N:NR::::::D:S:D::H:V::EN Hmu1588 -:::::ME::I::::::NT::AFDSV:::::E::VDD::A::V::::I:R:::::::::: consensus LSLSVRDGELLTLLGPSGCGKTTTLRLIAGLERPDGGAIRLNGEVVAGGSTFVPPEERDV #oth 11.3.43..1..1.............21...12124.51424455121533.121.3.31 Hut2580 :D:T:Q:::::::::::::::::::::L:::DE::A::::VA::T:::EG:::K::N::: NP3648A :::D:::::::::::::::::::::::::::::::N:TV::GSTP:S:SE-:::::Q::: HVO_1707 :::::EE::I:::::::::::::::::::::D:::::EV::::N::S::D::RA::::G: Hbo3129 ::::::E::I:::::::::::::::::L::::::::::V::::R::S:TE-:::::::G: HQ2543A :::::NS::I::::::::::::::::::::::AV:::IV::::KN:T:S:-:::::Q:G: hla0066 V::D:NP:::::F:::::::::::::T:::::E:TE:Q:T:GD:T:S:DGA:::::Q::: VNG0921 ::::::E:::::::::::::::::::ML::::::T::T:E:DAQR:::PD:::AA:D:EI rrnAC0908 :::G:K::::::::::::::::::::M:::::::SD:Q:SIAD::I:D::S:RK::::N: Hmu1588 :::::N::::::::::::::::::::M:::::::S::S:QIEERA::D::::RK::::N: consensus GIVFQEFALFPHLTVAENIAFGLTDRSEDETDERVDELLELVDLPDHGDKSPDELSGGQQ #oth .2...21......212..1...15163331534..211.2..115433133123.....2 Hut2580 :L:::::::::::::G::V:::IQ:::D::I:Q::TD:::::G:D:YREA::ED:::::R NP3648A :V:::::::::::SAR::::::IQEW::A:QQ::::::::::G:V:::::::E::::::: HVO_1707 :V::::::::::::A::::::::K:L::S:R::::AD::D::G:ETQ::SY::::::::: Hbo3129 :V::::::::::::AR:::::::A:::DA::EQ::::::::::::RQ::SY::::::::: HQ2543A :V::::::::::::AR::V::::::H:SA:::H:::::::::::::QSESY::::::::: hla0066 :::::N:::::::::R:::::::G:-GA:A:AD::::M:D:::::E::E:T::Q:::::K VNG0921 :::::D:::::::S::::V:::::::D::A:AA::::M:A:::M:EM::R:V:Q:::::: rrnAC0908 :::::DY:::::::::::::::::EME::AVA::::::::::::SA:H::M:SQ:::::: Hmu1588 :::::DY::::::N:::::::::R:ADSR:A::::T::::::::T::RE:M:SK:::::: consensus QRVALARSLAPEPDILLLDEPFSNLDVRLRVEMREEVRRILKEAGVTAISVTHDQEEALS #oth ....1........22............2..12..1...3.1.21....1.........1. Hut2580 ::::::::::::::V::::::::::::G::E:::R:::::I::T::::V::::::::::: NP3648A :::::::::::::KL::::::::::::D::::::::::D:::::::::::::::::::M: HVO_1707 :::::::::::::A:::::::::::::D:::Q::::::::::::::::V:::::::::M: Hbo3129 :::::::::::::::::::::::::::D:::Q:::::::::::::::::::::::::::: HQ2543A :::::::::::::::::::::::::::D:::A:::::::::::::::::::::::::::: hla0066 ::::::::::::::V:::::::::::::::::::::::Q:::A:::::V::::::::::: VNG0921 ::::V:::::::::::::::::::::::::::::::::::::::::::V::::::::::: rrnAC0908 ::::::::::::::V:::::::::::::::::::::::K:::R::::::::::::::::: Hmu1588 ::::::::::::::V:::::::::::::::::::::::K:::R::::::::::::::::: consensus ISDRVAVMNDGRIEQVGDPEEVFQHPESRFVASFLGQASFLSGRVAGDRVETGLGTFDRE #oth ......1222.621.1.4.15..13.1.1...2...3.2.22133541612.43.43343 Hut2580 :::::::VR:::V::I:R::I:::Q:::::::E:::::G:V::TF:EGC:D:P::CL:AD NP3648A :::::::::N:::::::T::G:::Q:K:::::G:::H:::V::Y:EDGC::::V:CVPL: HVO_1707 :::::::::::DL::::E::Q:::::::::::G:::Y:G::P::I:::A:::E:::V::D Hbo3129 :::::::::::NL::::E::S:::::K:::::G:::Y:::IP:Y:S::::::D::NLP:: HQ2543A ::::::::S::H:::::K::A:::::::::::::::Y:::IP:Y:S::V:Q:EV::VP:: hla0066 :::::::::E:Q:::::R::S::ER:::K:::::::R::::E:HLRDGK::::I:R::AV VNG0921 :::::::L:::C::::::::G::E::::::::::::::A:::A::GS:T:D:AV:SY::A rrnAC0908 ::::::I::::T:A:I:::A:::EN:::::::::::::::::A::TN::I:::::S:NV: Hmu1588 ::::::I::::T:::::::A:::EN:::::::::::::::::A:::::DI:::M:::RTA consensus QINGLADEYDGARVDVLVRPDDLRARPAAP------------------------------ #oth 323.2353.33251.21.....23172444311111111111111111111111111111 Hut2580 R:E::DT::E::D:::::::::I::V::D::::::::::::::::::::::::::::::: NP3648A :V:::T:V:::SEI:LM:::::VC::::S::::::::::::::::::::::::::::::: HVO_1707 ::H:::P:::DTDI:I::::::VS:H:CDG:::::::::::::::::::::::::::::: Hbo3129 ::H:::A:::NT:I::::::::VS::ACE:G::::::::::::::::::::::::::::: HQ2543A ::H:::S::NQT:I:L::::::VSVCQSN:DRNDRQTRDHGNMTADGAGAHAQFTNTTKT hla0066 TLE:YDTV:::TP::::::::::::S::SA:::::::::::::::::::::::::::::: VNG0921 LLA::T:G:Q::M::::::::::::A:V:DA::::::::::::::::::::::::::::: rrnAC0908 LL::PVEA:N::M::::::::::Q:M:TNE:::::::::::::::::::::::::::::: Hmu1588 RL::PVEA:N::T::::::::::::I:T:E:::::::::::::::::::::::::::::: consensus -------------------EEANGRVVARQYLGPSFLYRVELESGDVVHCMHNHAEEFPL #oth 11111111111111111123734.411611.3..122.3.1123.2414.2...314456 Hut2580 :::::::::::::::::::AGT:::I:D:::T::::V:T:::D::AIL::E::::::LGM NP3648A ::::::::::::::::::::::::E::H:R::::TV:::::I::::::G::::::D:VS: HVO_1707 :::::::::::::::::::GDGH:K::GKR::::TI::E:::HG::TLL:::::D:TV:T Hbo3129 :::::::::::::::::::::PS::::::R::::T:::E::::T:ER:Q:::::D:DV:D HQ2543A TSSPISGTTADEYADTQIN:YGC:E::::R::::T:::E::::T:ES:Q:::::D:DI:E hla0066 ::::::::::::::::::::L:D:TI:S:::V::::I:::::::::::::L:::V:::D: VNG0921 ::::::::::::::::::TGAG::TI:K:::T::::I:H:::DN::::R:L::::DNMAI rrnAC0908 :::::::::::::::::::SK:D:Y::H:::N::::V:::::H:::::::::::V:T:EP Hmu1588 :::::::::::::::::::ST:D:Y:TQ:::N::::V:::T:H:::::::L:::S:S:EP consensus DEPVEVELDADHELAWFPRE----------------------- #oth 244.5241421.3...1.2221111111123111331111111 Hut2580 :KR:R:R:AT::P:::::A:::::::::::::::::::::::: NP3648A :D::F:SI:::::::::::GERKMADGGPDS:::TA::::::: HVO_1707 :GC:::T:::G:::::::::QR::::::PESGLYSD::::::: Hbo3129 :G::A::I::G:::::::::QR::::::PEA:::EQ::::::: HQ2543A SGV:DI:IN:::::::::::QR::::::PDE:::TDERYPRGI hla0066 ::S:GL::T:::P:::Y::-::::::::::::::::::::::: VNG0921 G:::A:S:VS::A:::Y:T:::::::::::::::::::::::: rrnAC0908 GQ::::D:V:::D:::Y:T:::::::::::::::::::::::: Hmu1588 G::::ID:T:::P:::Y:T::::::::::::::::::::::::