| ||||||||||||||||||||||||||||||||||||||||
| Pairwise sequence scores | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Consensus score | 2938 | HVO_2033 | Hmu0684 | VNG0898 | rrnAC2653 | HQ2452A | hla1844 | HVO_1399 | Hbo0150 |
| 1513 | HVO_2033 | 2711 | 2132 | 1172 | 1116 | 1046 | 1236 | 1197 | 1202 |
| 1692 | Hmu0684 | 2132 | 2730 | 1290 | 1212 | 1136 | 1300 | 1261 | 1250 |
| 1933 | VNG0898 | 1172 | 1290 | 2984 | 1681 | 1409 | 1616 | 1713 | 1682 |
| 2050 | rrnAC2653 | 1116 | 1212 | 1681 | 3147 | 1831 | 1660 | 1720 | 1703 |
| 1801 | HQ2452A | 1046 | 1136 | 1409 | 1831 | 2684 | 1468 | 1610 | 1598 |
| 2133 | hla1844 | 1236 | 1300 | 1616 | 1660 | 1468 | 3299 | 1917 | 1808 |
| 2323 | HVO_1399 | 1197 | 1261 | 1713 | 1720 | 1610 | 1917 | 3106 | 2374 |
| 2302 | Hbo0150 | 1202 | 1250 | 1682 | 1703 | 1598 | 1808 | 2374 | 3327 |
484 symbols consensus -----------------SDDARSTARRALARLVDASVLERLLISVAALLLALLVGAVIVL #oth 111122221222234444455556433534234441361143223323322351.42224 HVO_2033 :::::::::::::VSDAATGV::L:D:IA::ML:::::::VV:ALV:TA::::I:::::A Hmu0684 :::::::::::::VSTA::R::AVLD::AD:MLR::::::FALA:VST:::::I:S:::W VNG0898 :::::::::::::::::MSQDTPRW:::I::::::::K:::V::::::V::VA::F:::T rrnAC2653 MSDGGPSQNGDDPPTPD:::RW:QY:QR:I::GQT::G::I::A:S::::S:V::T:::T HQ2452A :::::::::::::::::-------------------------------MTTCT::DAVY- hla1844 ::::VSRTNTGSDDGSG:::IP:I:::VI:PF::R::A:::::::::I::SII::FA::: HVO_1399 :::::::::::::::::-MS:AE::KSV:R::TA::AT::I:::F:::VM:VVI::G:I: Hbo0150 ::::::::::::::MSTIT:::R:::SM:R:::AL:GV::::::L:::V::IF:::GLI: consensus ASGR-ATC-TAA----LFG--TGFCYDPVEVFLVLFNGALGNPF-------PG------- #oth 3312423143334211421122331.11231253.22..3.4231123243422332211 HVO_2033 :::-:---:---::::---::----::A::FVSS:VY::V::VS:::::::--::::::: Hmu0684 :T:-:---:---::::---::----::A::FVTS:LY::V::LS:::::::--::::::: VNG0898 LA:LA:S:T:HPT:::I::VR:PS::::FA:YSE::L::I:H:E::QVLFGT:::::::: rrnAC2653 :A:LL:::RSPVL:::T:::S:TL::::FY::NR::L::::D:::::::::A:::::::: HQ2452A ----:---:---::::Y:::::::::N::L::DR::L::::D:::::::::S:::::::: hla1844 V:::V:Q:S:::WTMP:T:::I:::::::::Y:::::::::Y:::::AVGE::LIDP::: HVO_1399 V:::VT::Q:::TT:::::::::::::::::Y:::::::::E:::::LVNS::VLKPLNP Hbo0150 V:::IT::SQ::AV::Y:::::::::::T:::F::::::F:::LNPKLLTG:LVNPSWNP consensus -------------------AWNPLNFNFALTLRETTLLIFTGLSVAVAFRAGLFNIGTQG #oth 1111111111111111111513123443242.22112.11..11..11.1..3....1.. HVO_2033 :::::::::::::::::::-------:L:FM::QSSM::L::VA::::::::V::::V:: Hmu0684 :::::::::::::::::::-------:V:F:::QS:M::L::VA::::::::V::::V:: VNG0898 :::::::::::::::::::T:T::D:RV:SL::S::::V::::A:::S::::M::::V:: rrnAC2653 :::::::::::::::::::G:S:::AQ::A::::::I:V:::::::L:::::I::::::: HQ2452A :::::::::::::::::::::S:-EGQ:SV::::::::::::::::L::Q::I::::::: hla1844 :::::::::::::::::::::T:F:LSLG:::S::::::::::::::::::::::::::: HVO_1399 :::::::::::::::::::D::::::G:::::K::::::::::::::S:::::::::::: Hbo0150 LHGPVTFSGPLVTKALFTAQ::::::SA::::K:::::V::::::::::::::::::::: consensus QLVVGGLATALTVLFAAPLLPGGPVGGVLLIPLGTLAGAVAGGLYGAIPGALKAYADANE #oth .222.111111533523111131422424132313221333..31111..31...21... HVO_2033 :F::::F:AT:GI::::::::NS::SAIP:LA:A::LALA:::A:::L::VM::::G::: Hmu0684 :F::::F:::::I::L::::::::::::V:MV:::I:AI::::A:::L::LM:::::::: VNG0898 ::LL:A::A::ATVY::::V:::V::TLV:V:V:IV:::L:::VW::::::::::::::: rrnAC2653 ::II:A::A:::::W:GS:V-S:T:AL::F::::L::::IG::::::::::::::::::: HQ2452A :M::::::::VL::Q:SSVV-S:VI:S:::::F:VVV:V:S:::::S:::I::::S:::: hla1844 ::::::::::::::A::::::A:::A::A::VA:V:::::G::FW::::::::::T:::: HVO_1399 :::L:::::::FSF:V:::::S:L:::LI::::AVIV::LV::::::::::::::::::: Hbo0150 :::I:::V:::V:GILV:VV:::FA:SI::::V::::::A:::::A:::::::::::::: consensus VITTIMLNFIAAGVAYVLVSEFFRPPDSQAVNTEPLPDYAQLPGVAFG--QRGDFSLLAL #oth .........1.342222123441433323244.443.332422444.3113252.1222. HVO_2033 :::::::::::S::V:F:LDAYL::EGAA:P:::QF:::VG:::LV:E::-SPS::I:G: Hmu0684 :::::::::::S::V:F:IDAYL::SGTS:P:::SF:::VD:::F:::::-S:S::VIG: VNG0898 :::::::::V::NL:::A::TW:T:A::SL:Q:ATI:AA:RI:N:P::FQP:DN::::G: rrnAC2653 :::::::::V:VR:TLY::RNH:AD:T:::TQ:PT::VEG:F:SIL:D::P:T::::::: HQ2452A :::::::::::T::TLY:::GV:KD:E:P:NR:V:::E:::F:T:I::::G:Q::::V:: hla1844 ::::::::::::N::::::L:V::AEG:SV:A::YV:E:::FLPWL:P:::SS::A:::: HVO_1399 ::::::::::::QI:F:::::::GN::::V:E:T::::W:T:LP:::P:::G:::::::: Hbo0150 ::::::::::::KL:::A:::::KN::::VIE:A::::::T:GS:V:P:::GS:::I:S: consensus LFALALVVGVYYLLERTSFGYDLRTSGIQPEAAEYGGVDAKRTIVTSMTLSGALGGIGGA #oth 3312232422231323.21.1.12.1.5.24..2.1..231113122142..121.32.1 HVO_2033 GV::LT::V::LVMD::G:::::V:::Y:EP::K:S:::P::M::RT::I::MIA:LA:: Hmu0684 GV:::TAF:::VVMA::::::::V:::Y:ES::A:S:::P:::V::T:AF::MVA:VA:: VNG0898 :::V::::::A:::A::::::::::::S:::::A::::KE:::M::::GI:::::::S:: rrnAC2653 :I:::F:G:::::::H:A:::::::A::::A::::::::SA:::L::L:::::::::::: HQ2452A ACG:LAIG:L:::::Y:A::::IQ:::L::G::::::::::::::A:L::::::::VA:S hla1844 VVGIGFIA:L:::V:H:::::::::::V:AA:::::::N::A:T:RA::::::I::V::: HVO_1399 A:G:::::A:WF:::Q:::::::::::E:::::::::::::::T::::F:::::::M::: Hbo0150 ::::L::I:IW::I::::Y:F::::::::::::::::::::::V::::M::::::::::: consensus MFVLMVLGKWQ--SGVPSLGFDGITVSILAGNNPLGVVPAALLFGVLKSGSLAIGFATDV #oth 3312.32.32311333.32...1.1..1..1...3.141111...3.12.34312.412. HVO_2033 L:AI:I::YYSDPNTF:TF:::A:A::L::A:::::::::G::::G:DA:GQY:::TL:: Hmu0684 ::AI::::YYSDP:TF:TF:::A:A::L::A::::::I::G::::G:DA:GQY:::TL:: VNG0898 :L::::Q:R:L:::NL:Q:::::::::::::::::::GF::::::::::::A::::G:N: rrnAC2653 V::M:T:::F:::T:I::Y:::::::::::::::I:A:F::::::::::::NVVA::::: HQ2452A :Y:M::::TF:::::L:AY:::::::::::::::A::AFT::::::::::TTVVQ::::: hla1844 VW:::SQ:R:M::AS::A:::::::::::::::::::L:::F:::I::G:A:E:::R::: HVO_1399 IW::::M::::::A::::::::::::::::::::F::::::::::T:::::::VQ:G:G: Hbo0150 :W::::M::::::T::::::::::::::::::::::AI:::::::T:::::::VQ:N:G: consensus PPQLVGVLRGLIILFVAMPEFFRMIGRRI-GL----PD---VATDGG-----------GG #oth .32..1111...1....1..1..3414451433311134342223213211112222112 HVO_2033 :SE::DGVI:::V::::A::L::AA:QHT:S:::::--:::------::::::::::::: Hmu0684 :SE::DGVI:::V::::A::L:::SA::F:::::::--:::------::::::::::::: VNG0898 ::A::D:::::::::::::::::LL:G:L::V::::--:::------::::::::::::: rrnAC2653 :::::::::::::::::::::::I::::L:AARE::::SPAT::A::::::::::::::A HQ2452A :::::::::::::::::::::::LV:Q:V:V-:D:::GSKP::::D:NL::::::::EAT hla1844 :TE::::::::::::::::::::::::YA:::GSRG:SGPETSGS::TGPADDAAAVE:: HVO_1399 :K::::::::::::::::::::::L:SA::D:E:::::RET::::::RL::::::::::: Hbo0150 :K:::::::::::::::::::::A::TN:VD:EE::::QKA::::::R:::::SVSTE:: consensus DD-- #oth 1431 HVO_2033 :RE: Hmu0684 ::R: VNG0898 :VDA rrnAC2653 :::: HQ2452A :E:: hla1844 ETDA HVO_1399 ::E: Hbo0150 :E::