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[E] (AppF) COG4608 ABC-type oligopeptide transport system, ATPase component
5 genomes BUD1842 5 proteins
a Hsa
Halobacterium
sp. NRC-1
b Hma
Haloarcula
marismortui
f Hvo
Haloferax
volcanii
g Hbo
Halogeometricum
borinquense
h Hmu
Halomicrobium
mukohataei
i Hut
Halorhabdus
utahensis
j Hla
Halorubrum
lacusprofundi
q Nph
Natronomonas
pharaonis
x Hwa
Haloquadratum
walsbyi

VNG2343

rrnAC3295

HVO_0058

- - -

hla0453

-

HQ1477A

Pairwise sequence scores
Consensus score3421 rrnAC3295 HVO_0058 HQ1477A hla0453 VNG2343
2496rrnAC3295 3609 2221 2089 1936 2153
2547HVO_0058 2221 3418 2027 2018 2130
2632HQ1477A 2089 2027 3660 2112 2267
2530hla0453 1936 2018 2112 3379 2263
2728VNG2343 2153 2130 2267 2263 3424

491 symbols
consensus       --------------MSNTVEERSD---------SDQASDPLVEVNDLKTYYGGGGLFADP
#oth            1111111111112333422323332122222222334322112.41..11.111.31222
rrnAC3295       MPGLMVATATVPGTPAD::R:VTQMSESVVDTV:H::DET:LD:Q::::::E::::LGGD
HVO_0058        ::::::::::::MSTTS:E::::T:::::::::-EARG:TIL:::::::::ED::FLGSN
HQ1477A         ::::::::::::::::K::DS:P:ESARSPQLE::VTT::::T:K::::::::D:A::::
hla0453         :::::::::::::::::A::QS:P:::::::::-TEE:EV::::EG::K::::D::::::
VNG2343         :::::::::::::MSQQSIQSTA::::::::::A::H:Q:::::T:::KH::D::R:SG:

consensus       PVKAVDGVNFEIQRGETLGLVGESGCGKTTLGRTLIQLETATAGTVSFDGTDITTLSGSD
#oth            ........2.2.31...1.......1..1......32..2..2.31321.1.1.2.2.32
rrnAC3295       ::::::::::::S::::F::::::::::::::::::::::::S:::::::::::E:::G:
HVO_0058        ::::::::S:D:::::::::::::::::S::::::MR::E::::E:KLN:::::::::::
HQ1477A         ::::::::S:Q:E::::::::::::S:::::::::V::::::::DIT:::::V:::H:DS
hla0453         ::::::::D:::R:::::::::::::::S::::::LA::R::E:SIVYN:::V:::::TE
VNG2343         :::::::::::::E:::::::::::S::::::::::::::::E:::::::R:::K:T:::

consensus       LKQWRKNAQMVFQDPESSLNDRMTVGEIIREPLDAHDWGTPSERRERVRELLSAVGLQPE
#oth            .111.221.1.....1....1...1...1.....1.1121331..21.32..34...233
rrnAC3295       :::::R::::::::::::::::::::::::::::V:EQ::AR::::K::T::DQ:::M::
HVO_0058        :::F::DV:::::::D::::E:::::::V:::::V:::K:::::::::::::ET::::EQ
HQ1477A         :TE::QR::I::::::::::::::::::::::::::E:::K::::N::QT::AD::::::
hla0453         ::E:::::::::::::::::::::::::::::::::::K:MND:::::LD:::::::PDK
VNG2343         :::::::::I:::::D::::::::I:::V:::::::::NS:A:::D::K::::S::::AD

consensus       HYYRYPHQFSGGQRQRIGIARALALEPEFLVLDEPVSALDVSVQAKILNLLEDLQEEFGL
#oth            ..2.............1..........1.31.........1....1.11..11..31.1.
rrnAC3295       :::::::::::::::::::::::::::::V:::::::::::::::Q::::::E:::::::
HVO_0058        :::::::::::::::::::::::::::::II::::::::::::::::::::::::N::::
HQ1477A         ::V:::::::::::::V::::::::::::::::::::::::::::::IS::D:::AK:::
hla0453         ::F::::::::::::::::::::::::D:::::::::::::::::::IS:::::::::N:
VNG2343         :::::::::::::::::::::::::::::M::::::::::A::::::::::::::D::::

consensus       TYLFIAHDLSVVRHICDRVAVMYLGKIMEIGETEELFQDPANPYTRALLSAIPEPDPTIE
#oth            ...1.....1...1.1...1.1...12..2.1111113314....21...1..2...133
rrnAC3295       :::::::::::::::::::G:::::NL::V:P::Q:::S:E:::::::::::::::::VQ
HVO_0058        :::::::::A:::::::::::::::NM::::PAD:M:DQ::::::H::::S:::::::::
HQ1477A         :::::::::::::::::::::L::::::::::::Q:Y:N:Q::::::::::::N:::QD:
hla0453         :::L:::::::::Y:S:::::::::::::M::A::::T:AS::::QS:::::::::::ET
VNG2343         ::::::::::::::::::::::::::::::::::::YA:AK:::::S::::::R:::::D

consensus       RDRITLPGTPPSPRDPPAGCQFSTRCPAKIRPEAYADLDADLWERIEQFREVVRERSRAD
#oth            33....2.2....111.3..211....1111.122333.332.31.13..1.2...2.33
rrnAC3295       V:::::::S::::::::Q::P:A::::VR::::DIEAS::V-:D::RE::D:I::::::E
HVO_0058        ::::::R:::::::::::::P::::::V:::::::R:M:PE::::::V::::L:::::::
HQ1477A         TA:::::::::::::::T::::A::::::L::SELDH:::TT:::::R::::::::::V:
hla0453         SR::::S::::::S:A:P::NL::::::::K:::::N::S:::NA:::::::::::A:IT
VNG2343         :N::::::A:::::N::::::::::::::::::::::I:D:T:S::::::::::::T:DQ

consensus       PSVRDRVRRRLGRFSARDDIEEAVADLFGDL-DLPPDVDNHIETAAEYVKDGRPDAAREY
#oth            31322.222211322341121123412.3.2123.331423133.22332312122.233
rrnAC3295       Q:IGE:LKE:::FDT:LA:S::I:EEE:S:V:T:::::QE:V:Q::S:LS::D:::::A:
HVO_0058        ::LS::::KL:::E:H:AGMD:IIPE::::F::A:S::M:::HE::D:AENDDE::::T:
HQ1477A         :G::G:IT:Q::V:::H:::DS::T::::::QEF::A:V:P::S:V:HI:S:Y:EK:::L
hla0453         L:TS::::::FD::ERF:::::SM::T:D:::EV:ER::EQ:R::V:M::R:::TE:Q:H
VNG2343         MG:::::K::::T::KY::::::AD:::A:V::::AGITDTVD::I:A::::::TE:HDA

consensus       LRDEFGSVCDRERPEMHAVSDAG-------------RLSYCHRHASEYDDVADVLARRAN
#oth            .322.112..2.3.3333.3241111111111111113.2..1.43.1221223243144
rrnAC3295       ::EV:::Q::T:T:QYYD:D:-:::::::::::::::M:F:::::Q:HVSPG:E:RQ:GY
HVO_0058        :HE:::::::H::::QL::GNR:::::::::::::::::L::::EA::EEP:T:FETLVQ
HQ1477A         :::T:::I::::E:TLQ::N:TDTSQNSKVSSIATTQR::::C:K::H:::STIFD::L:
hla0453         :Y:::A::::::P::::K::AS:::::::::::::::Y::::::TD::E::GP:IT:::D
VNG2343         :TR:::G:::T:::D::Q::::::::::::::::::::::::::D::::S:::T::D:SH

consensus       D----------
#oth            33221111111
rrnAC3295       :THDG::::::
HVO_0058        -::::::::::
HQ1477A         :PDAGTHSSVD
hla0453         SE:::::::::
VNG2343         E::::::::::