|
Pairwise sequence scores | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Consensus score | 3199 | HVO_2413 | Hbo2114 | VNG2649 | Hut1501 | NP0304A | rrnAC2406 | Hmu0162 | hla0368 | HQ3385A | HVO_0359 | Hbo1121 |
2870 | HVO_2413 | 3186 | 2930 | 2639 | 2728 | 2751 | 2687 | 2709 | 2784 | 2778 | 2824 | 2809 |
2923 | Hbo2114 | 2930 | 3181 | 2707 | 2752 | 2841 | 2776 | 2813 | 2834 | 2811 | 2817 | 2827 |
2881 | VNG2649 | 2639 | 2707 | 3222 | 2776 | 2828 | 2811 | 2826 | 2796 | 2731 | 2785 | 2767 |
2905 | Hut1501 | 2728 | 2752 | 2776 | 3227 | 2892 | 2796 | 2828 | 2828 | 2826 | 2848 | 2839 |
3015 | NP0304A | 2751 | 2841 | 2828 | 2892 | 3206 | 2901 | 2871 | 2907 | 2826 | 2876 | 2856 |
2954 | rrnAC2406 | 2687 | 2776 | 2811 | 2796 | 2901 | 3191 | 2969 | 2859 | 2720 | 2844 | 2847 |
2988 | Hmu0162 | 2709 | 2813 | 2826 | 2828 | 2871 | 2969 | 3198 | 2942 | 2808 | 2888 | 2878 |
3034 | hla0368 | 2784 | 2834 | 2796 | 2828 | 2907 | 2859 | 2942 | 4115 | 2853 | 2905 | 2930 |
2931 | HQ3385A | 2778 | 2811 | 2731 | 2826 | 2826 | 2720 | 2808 | 2853 | 3200 | 2978 | 2926 |
3024 | HVO_0359 | 2824 | 2817 | 2785 | 2848 | 2876 | 2844 | 2888 | 2905 | 2978 | 3206 | 3064 |
3009 | Hbo1121 | 2809 | 2827 | 2767 | 2839 | 2856 | 2847 | 2878 | 2930 | 2926 | 3064 | 3203 |
541 symbols consensus ------------------------------------------------------------ #oth 111111111111111111111111111111111111111111111111111111111111 HVO_2413 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2114 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2649 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1501 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0304A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2406 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0162 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0368 VSRPGSSPRTGRSRSPGRRTSSRSRPPTPAGSTFPDGVLAARRRRVRCSETWVGYSRSLR HQ3385A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0359 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1121 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus -----------------------------------------------------------M #oth 111111111111111111111111111111111111111111111111111111111121 HVO_2413 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo2114 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: VNG2649 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hut1501 ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::MS NP0304A ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::MS rrnAC2406 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hmu0162 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: hla0368 YRAASARPGTRNRTVCRSPVPRVVENRPTASRLSVGRIETVLVESTETYSQSALARDYP: HQ3385A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0359 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1121 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus SDKPHQNLAIIGHVDHGKSTLVGRLLFETGSVPEHVIEQHREEAEEKGKGGFEFAYVMDN #oth 2144.....1..........1.....1....1...1...11...11...1.......... HVO_2413 A::::::::::::::::::::::::::::::::::I::::::::AS:::S:::::::::: Hbo2114 :E:::::::::::::::::::::::::::::I:::I:::::::::::::S:::::::::: VNG2649 ::NR:::::V::::::::::M:::::Y:::::::::::::K::::::::::::::::::: Hut1501 E:TA:::::::::::::::::::::::::::::::::::::::::::::::::::::::: NP0304A E::::::::V::::::::::M::::::::::::::::::Y:::::::::::::::::::: rrnAC2406 ::EQ::::::::::::::::::::::Y:::::::::::::K::::::::::::::::::: Hmu0162 ::R-::::::::::::::::::::::Y:::::::::::::K::::::::::::::::::: hla0368 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HQ3385A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: HVO_0359 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: Hbo1121 :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: consensus LAEERERGVTIDIAHQEFDTDEYYFTIVDCPGHRDFVKNMITGASQADNAVLVVAADDGV #oth ................1.2.1513.....1..................1.1......... HVO_2413 ::::::::::::::::R:::EK:::::::T::::::::::::::::::H:I::::::::: Hbo2114 ::::::::::::::::R::::K:::::::T::::::::::::::::::H::::::::::: VNG2649 ::::::::::::::::::T::::E:::::::::::::::::::::::::::::::::::: Hut1501 ::::::::::::::::::::E::N:::::::::::::::::::::::::::::::::::: NP0304A :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: rrnAC2406 ::::::::::::::::::S::T:D:::::::::::::::::::::::::::::::::::: Hmu0162 ::::::::::::::::::S::A:D:::::::::::::::::::::::::::::::::::: hla0368 :::::::::::::::::::::N:::::::::::::::::::::::::::::::::::::: HQ3385A ::::::::::::::::::::ED:::::::::::::::::::::::::::::::::::::: HVO_0359 ::::::::::::::::::::::F::::::::::::::::::::::::::::::::::::: Hbo1121 ::::::::::::::::::::::F::::::::::::::::::::::::::::::::::::: consensus APQTREHVFLARTLGIGELIIAVNKMDLVDYSESKYKQVVEEVNDLLKQVRFNTDDAKFI #oth 1...1.....1.....3.1.111....2...5.35.331252.54.15..2.43311311 HVO_2413 ::::::::::::::::E::::::::::V:::::DS::::K:::QQ::Q:::::S:::G:: Hbo2114 ::::::::::::::::E::::::::::I:::::DT::::KA::QE:::::Q:::A::S:: VNG2649 ::::::::::S:::::D:::V::::::V:::D::::NE::SG:K::FG::G::P:::::: Hut1501 Q:::Q:::::::::::D:::V::::::::::E::R::ET:Q::TE:::::Q::::::S:: NP0304A Q:::Q:::::::::::D::::::::::::::D:N:::A::D:::Q::E::::::E::::: rrnAC2406 Q:::Q:::::::::::::::V::::::::::G::E::::::::K:::T::::DSEN:::: Hmu0162 ::::::::::::::::::::VG:::::::::N::D:E:::S::E::::::::G:E::S:: hla0368 ::::::::::::::::N:I::G:::::::::K::S:D::::::::::N::::A:::TT:V HQ3385A ::::::::::::::::N::::G:::::I:::::ET:ED:KT::DK:::::Q::AN:::Y: HVO_0359 :::::::::::::::::::::::::::V:::::D:::D:K:Q::K::::::::S:::TYV Hbo1121 ::::::::::::::::::::::I::::V:::::DT::::T:::QN:::::::QS:N:T:V consensus PISAFEGDNIAEASDNTSWYDGPTLLEALNNLPEPEPPTDAPLRLPIQDVYTISGIGTVP #oth 13.......1216.1114.1..322..1..4..212.....1..1........1...... HVO_2413 ::::::::::::P:E:MT:F::::V::S:::::::S::::::::V::::::::::::::: Hbo2114 :::::::::V::S:E:MD:F::::I::S::S::::S:::::::::::::::::::::::: VNG2649 AT:::::::VSDH::::P::::::::::::G::V:Q:::::D:::::::::::::::::: Hut1501 :S::::::::N:L:::MP::::::V::S:::::::::::::::::::::::::::::::: NP0304A :T:::::::VS:::E::::::::S::::::D::::Q:::::::::::::::::::::::: rrnAC2406 :V::::::::::E:EH:G::::EI::::::E::A:::::::::::::::::::::::::: Hmu0162 ::::::::::::R::::D::::DI::::::D::::::::::::::::::::::D:::::: hla0368 ::::::::::S:E:E::P:::::::::S::D:::S::::::::::::::::::::::::: HQ3385A :::::::::V::S::::::F:::S:::::::::::Q:::::::::::::::::::::::: HVO_0359 ::::::::::::R:::::::::DI:::::::::A:Q:::::::::::::::::::::::: Hbo1121 :::::::::::D::::::::::K:::::::D::A:::::::::::::::::::::::::: consensus VGRVETGILNTGDNVSFQPSDVGGEVKTVEMHHEEVPKAEPGDNVGFNVRGVGKDDIRRG #oth ...1...4233..1.2.1...11.....1.......14.1...........2........ HVO_2413 :::::::M:R:::::R:M:::A::::::I::::::::E:G:::::::::::::::::::: Hbo2114 ::::::::::::::::::::::S:::::I::::::::::::::::::::::I:::::::: VNG2649 :::I:::VM:::::::::::::::::::I::::::::N:::::::::::::I:::::::: Hut1501 :::I:::EMFP::D:T::::::::::::::::::::DR:G:::::::::::::::::::: NP0304A ::::::::::::::::::::::S::::::::::::::::::::::::::::::::::::: rrnAC2406 ::::::::::::::::::::::S::::::::::::::::::::::::::::::::::::: Hmu0162 ::::::::::V::::::::::::::::::::::::::::::::::::::::I:::::::: hla0368 ::::::::::I::::::::::::::::::::::::::::::::::::::::L:::::::: HQ3385A :::::::TVSP::D::::::::::::::::::::::DQ:G:::::::::::I:::::::: HVO_0359 :::I:::T::P:::::::::::::::::::::::::DQ:G:::::::::::::::::::: Hbo1121 :::I:::T::P:::::::::::::::::::::::::DQ:G:::::::::::::::::::: consensus DVCGPADDPPSVAETFQAQVVVMQHPSVITAGYTPVFHAHTAQVACTIESIDQKIDPASG #oth .....1121.2..2..2..1..........1.....1..........2.2111.2..1.. HVO_2413 :::::::::::::K::T::I::::::::::::::::I::::::::::F::L:::L::::: Hbo2114 :::::::E:::::::::::I::::::::::::::::I::::::::::F::::K::::S:: VNG2649 :::::::::::::D::::::::::::::::::::::::::::::::::::::K:M::::: Hut1501 :::::::::::::::::::I:::::::::::::::::::::::::::V:::::::::S:: NP0304A ::::::::::::::::::::::::::::::::::::::::::::::::::::K::::S:: rrnAC2406 :::::::::::::::::::I::::::::::E::::::::::::::::V::::K::::S:: Hmu0162 ::::::::::T::::::::I:::::::::::::::::::::::::::::::::::::S:: hla0368 ::::::::::::::::K::::::::::::::::::::::::::::::::E:N:::::::: HQ3385A :::::SSNA:T:::::K:::::::::::::::::::::::::::::::::::::L::::: HVO_0359 ::::::::::K:::::K:::::::::::::::::::::::::::::::::::::L::::: Hbo1121 :::::::E::::::::K::::::::::::::::::::::::::::::::A::::L::::: consensus EVAEENPDFIKSGDAAVVTVRPQKPLSIEPSSEIPELGSFAIRDMGQTIAAGKVLEVNER #oth .11..2....12....1..2......11.1.21.1......1......1......3.112 HVO_2413 :::::E:::::A:::::::L::::::::::::::A::::::::::::::::::::::::- Hbo2114 :::::E:::::A:::::::L::::::VL::::::::::::::::::::::::::::::K: VNG2649 :TQ:::::::Q::::::::::::::::L:::::::::::::V:::::::::::::D:D:A Hut1501 ::::::::::Q::::::::I:::::::::::G:::::::::::::::::::::::S:D:: NP0304A ::::::::::Q::::::::::::::::::S:N::::::::::::::::V::::::S:::: rrnAC2406 ::::::::::QN:::::::::::::::::::::::::::::::::::::::::::G:::: Hmu0162 ::::::::::QN:::::::I:::::::::::G:::::::::::::::::::::::D:::: hla0368 :::::::::::::::::::::::::::::::G:::::::::::::::::::::::::::: HQ3385A :::::D:::::::::::::::::::::::::N:::::::::V:::::::::::::::D:: HVO_0359 ::::::::::::::::I::::::::::::::::::::::::V:::::::::::::::::: Hbo1121 :::::::::::::::::::::::::::::::GD::::::::V:::::::::::::::::: consensus - #oth 1 HVO_2413 : Hbo2114 : VNG2649 : Hut1501 E NP0304A : rrnAC2406 : Hmu0162 : hla0368 : HQ3385A : HVO_0359 : Hbo1121 :