VNG5163
Gene VNG5163 in replicon pNRC100
TbpD coordinates the expression of over 10% of genes in the Halobacterium NRC-1 genome together with TfbA, consistent with the role of these two transcription factors in gene regulation. Some of the regulated genes code for heat shock proteins and their deletion leads to a temperature sensitive phenotype. See Coker and DasSarma BMC Genetics 2007 Sep 24;8:61. This gene was formerly labeled as a chp 04/02 (chp BLAST analysis).
- More about this gene
- Blast DNA databases using NCBI Blast
- Blast protein databases using NCBI Blast
- See protein structure at GTOP
- Protein interactions at STRING
- Get HOG data of this gene from local HOG database: aHOG4421
- Get COG data from NCBI's COG database: COG2101
- Get BUD data for this gene from our local BUD database: BUD4421
- Retrieve flanking sequence
| Gene ID | Name | Size (bp) | Annotation |
|---|---|---|---|
| 5156 | arlR17 | 390 | transcriptional regulator |
| 5157 | vng5157 | 297 | no entry |
| 5160 | vng5160 | 495 | no entry |
| 5163 | tbpD | 558 | transcription initiation factor IID |
| 5164 | vng5164 | 609 | no entry |
| 5165 | int | 558 | no entry |
| 5166 | vng5166 | 210 | no entry |