The Haloarchaeal Genome Database

Sequence Editor

Input Window (Single sequence only. format: fasta, GCG, or plain sequence. Numbers and spaces are okay.)

Haloferax mediterranei ATCC 33500 chromosome, complete genome
gi|389845493|ref|NC_017941.1|:1179006-1179200  Length: 195  Fri Jul 20 14:06:11 2012  Type: N  Check: 3183  ..

       1  ATGGCGAAAG GCAAGGTTGC ATTCTTCAAG TCCTCCGGCG GCTACGGCTT

      51  CATCGAGACA GAAGACCACG ACGACGACGT GTTCTTCCAC ATGGAGGATA

     101  TCGGCGGCCC TGACCTCGAA GAGGGTCAGG AAGTGGAGTT CGAAATCGAG

     151  CAGGCCGATA AAGGCCCGCG TGCGATCAAC GTAACGCGGC TCTAA

Output Window

Select Operation

Base Operations To RNA To DNA Remove non-DNA characters
Reverse Complimentary Complimentary + Reverse

Formatting Operations To Triplets To Lower Case To Upper Case To Single-lined

Strand Operations To Double Strand To Top Strand To Bottom Strand

Spacing/Numbering Operations Remove Spaces Remove Numbers Remove Spaces and Numbers Number/Re-number It Bases Per Line

Translation Operations Translate It

Sequence Format Format It

Miscellaneous Operations Search sub-sequence